RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 TAF1P21675 1872 aa18.1■□□□□ 0.49
SHANK2-210ENST00000449116 MROH5Q6ZUA9 1318 aa18.1■□□□□ 0.49
SHANK2-210ENST00000449116 PPEF1O14829 653 aaPredicted RBP18.1■□□□□ 0.49
SHANK2-210ENST00000449116 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
SHANK2-210ENST00000449116 APBB1O00213 710 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 PRPF40BQ6NWY9 871 aaKnown RBP18.09■□□□□ 0.49
SHANK2-210ENST00000449116 TTLL6Q8N841 843 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 KIF1BPQ96EK5 621 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 PIM2Q9P1W9 311 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 MINPP1Q9UNW1 487 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 SPEF2Q9C093 1822 aa18.09■□□□□ 0.49
SHANK2-210ENST00000449116 SASH1O94885 1247 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 SP8Q8IXZ3 490 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 LRRCC1Q9C099 1032 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 ATP6V0A2Q9Y487 856 aa18.08■□□□□ 0.48
SHANK2-210ENST00000449116 CHRNDQ07001 517 aa18.07■□□□□ 0.48
SHANK2-210ENST00000449116 TFCP2Q12800 502 aa18.07■□□□□ 0.48
SHANK2-210ENST00000449116 ANKRD45Q5TZF3 282 aa18.07■□□□□ 0.48
SHANK2-210ENST00000449116 CEP126Q9P2H0 1117 aa18.07■□□□□ 0.48
SHANK2-210ENST00000449116 VGLL2Q8N8G2 317 aa18.06■□□□□ 0.48
SHANK2-210ENST00000449116 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
SHANK2-210ENST00000449116 ANKRD2Q9GZV1 360 aa18.06■□□□□ 0.48
SHANK2-210ENST00000449116 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-210ENST00000449116 ZBTB47Q9UFB7 747 aaPredicted RBP18.06■□□□□ 0.48
SHANK2-210ENST00000449116 PDE8BO95263 885 aa18.05■□□□□ 0.48
SHANK2-210ENST00000449116 NUCB1Q02818 461 aa18.05■□□□□ 0.48
SHANK2-210ENST00000449116 DALRD3Q5D0E6 543 aaKnown RBP18.05■□□□□ 0.48
SHANK2-210ENST00000449116 LRRC37AA6NMS7 1700 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 CACNA1SQ13698 1873 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-210ENST00000449116 TAF5LO75529 589 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 SLC51AQ86UW1 340 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 CHD1LQ86WJ1 897 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 CLASRPQ8N2M8 674 aaKnown RBP18.04■□□□□ 0.48
SHANK2-210ENST00000449116 HELBQ8NG08 1087 aaPredicted RBP18.04■□□□□ 0.48
SHANK2-210ENST00000449116 C7orf43Q8WVR3 580 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 IL1RAPL2Q9NP60 686 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 GPR108Q9NPR9 543 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 AKAP2Q9Y2D5 859 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 SLX4Q8IY92 1834 aa18.04■□□□□ 0.48
SHANK2-210ENST00000449116 BRCA1P38398 1863 aaKnown RBP18.03■□□□□ 0.48
SHANK2-210ENST00000449116 XDHP47989 1333 aa18.03■□□□□ 0.48
SHANK2-210ENST00000449116 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
SHANK2-210ENST00000449116 CC2D2BQ6DHV5 1058 aa18.03■□□□□ 0.48
SHANK2-210ENST00000449116 ANKIB1Q9P2G1 1089 aa18.03■□□□□ 0.48
SHANK2-210ENST00000449116 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.03■□□□□ 0.48
SHANK2-210ENST00000449116 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
SHANK2-210ENST00000449116 GPSM2P81274 684 aa18.02■□□□□ 0.48
SHANK2-210ENST00000449116 PUM3Q15397 648 aaKnown RBP18.02■□□□□ 0.48
SHANK2-210ENST00000449116 LNPKQ9C0E8 428 aa18.02■□□□□ 0.48
SHANK2-210ENST00000449116 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
SHANK2-210ENST00000449116 ZNF219Q9P2Y4 722 aaPredicted RBP18.02■□□□□ 0.48
SHANK2-210ENST00000449116 NSFL1CQ9UNZ2 370 aaKnown RBP18.02■□□□□ 0.48
SHANK2-210ENST00000449116 ZNF609O15014 1411 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 C21orf2O43822 256 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 FGFR2P21802 821 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 KCNJ4P48050 445 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 UBE4AQ14139 1066 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 ATP2B3Q16720 1220 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 GRIPAP1Q4V328 841 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 SOGA3Q5TF21 947 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 OLFM4Q6UX06 510 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 AACSQ86V21 672 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 MPNDQ8N594 471 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 EAF2Q96CJ1 260 aaPredicted RBP18.01■□□□□ 0.47
SHANK2-210ENST00000449116 WWC3Q9ULE0 1092 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 LEMD3Q9Y2U8 911 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 A0A1B0GUL6 1792 aa18.01■□□□□ 0.47
SHANK2-210ENST00000449116 A0A1B0GUL7 405 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 ATP2B4P23634 1241 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 CCDC93Q567U6 631 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 LPIN2Q92539 896 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 BCL11AQ9H165 835 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 GGA1Q9UJY5 639 aa18■□□□□ 0.47
SHANK2-210ENST00000449116 ZNF804BA4D1E1 1349 aa17.99■□□□□ 0.47
SHANK2-210ENST00000449116 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
SHANK2-210ENST00000449116 SLC5A1P13866 664 aa17.99■□□□□ 0.47
SHANK2-210ENST00000449116 DPP8Q6V1X1 898 aaPredicted RBP17.99■□□□□ 0.47
SHANK2-210ENST00000449116 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 LTBP1Q14766 1721 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 SNAP23O00161 211 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 UFL1O94874 794 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 IFIT1P09914 478 aaKnown RBP17.98■□□□□ 0.47
SHANK2-210ENST00000449116 TIMM10P62072 90 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 TBC1D16Q8TBP0 767 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 NEUROD6Q96NK8 337 aa17.98■□□□□ 0.47
SHANK2-210ENST00000449116 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
SHANK2-210ENST00000449116 C16orf71Q8IYS4 520 aaPredicted RBP17.97■□□□□ 0.47
SHANK2-210ENST00000449116 XAGE2Q96GT9 111 aa17.97■□□□□ 0.47
SHANK2-210ENST00000449116 POLLQ9UGP5 575 aa17.97■□□□□ 0.47
SHANK2-210ENST00000449116 DBNLQ9UJU6 430 aaKnown RBP17.97■□□□□ 0.47
SHANK2-210ENST00000449116 DUOX1Q9NRD9 1551 aa17.96■□□□□ 0.47
SHANK2-210ENST00000449116 WTIPA6NIX2 430 aaPredicted RBP17.96■□□□□ 0.47
SHANK2-210ENST00000449116 C6orf229H3BNL8 230 aa17.96■□□□□ 0.47
SHANK2-210ENST00000449116 PDE4AP27815 886 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms