RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GPT2Q8TD30 523 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 MED14O60244 1454 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 GOLGA6L9A6NEM1 432 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 GPTP24298 496 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 ATP2B3Q16720 1220 aa19.25■□□□□ 0.67
TCOF1-206ENST00000445265 IQCA1Q86XH1 822 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 PRDM10Q9NQV6 1147 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 HELLSQ9NRZ9 838 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 PNPLA6Q8IY17 1366 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 EPS15P42566 896 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 APOBRQ0VD83 1088 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 LLPHQ9BRT6 129 aaKnown RBP19.24■□□□□ 0.67
TCOF1-206ENST00000445265 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 CCDC82Q8N4S0 544 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 AOPEPQ8N6M6 819 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 IGSF1Q8N6C5 1336 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 QRICH2Q9H0J4 1663 aa19.24■□□□□ 0.67
TCOF1-206ENST00000445265 SPTLC2O15270 562 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 TNNI3KQ59H18 835 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 LEKR1Q6ZMV7 388 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 ZCRB1Q8TBF4 217 aaKnown RBP19.23■□□□□ 0.67
TCOF1-206ENST00000445265 SUCLG2Q96I99 432 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 ALG1Q9BT22 464 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 FPGT-TNNI3KV9GXZ4 949 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 PRC1O43663 620 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 ZNF500O60304 480 aaPredicted RBP19.23■□□□□ 0.67
TCOF1-206ENST00000445265 CUL4AQ13619 759 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 SETQ01105 290 aaPredicted RBP19.23■□□□□ 0.67
TCOF1-206ENST00000445265 ZBTB43O43298 467 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 KLHL10Q6JEL2 608 aa19.23■□□□□ 0.67
TCOF1-206ENST00000445265 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.23■□□□□ 0.67
TCOF1-206ENST00000445265 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
TCOF1-206ENST00000445265 SOGA3Q5TF21 947 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 LMTK2Q8IWU2 1503 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 CASQ1P31415 396 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 CAVIN4Q5BKX8 364 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 ZNF652Q9Y2D9 606 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 KIF5CO60282 957 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 TUBB4AP04350 444 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 BEND3Q5T5X7 828 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 BRAPQ7Z569 592 aa19.22■□□□□ 0.67
TCOF1-206ENST00000445265 LTKP29376 864 aa19.21■□□□□ 0.67
TCOF1-206ENST00000445265 SLC26A6Q9BXS9 759 aa19.21■□□□□ 0.67
TCOF1-206ENST00000445265 CLSTN2Q9H4D0 955 aa19.21■□□□□ 0.67
TCOF1-206ENST00000445265 USP6P35125 1406 aa19.21■□□□□ 0.67
TCOF1-206ENST00000445265 TXLNBQ8N3L3 684 aa19.21■□□□□ 0.67
TCOF1-206ENST00000445265 LUC7LQ9NQ29 371 aaKnown RBP19.21■□□□□ 0.67
TCOF1-206ENST00000445265 CEP152O94986 1710 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 UBASH3AP57075 661 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 LEO1Q8WVC0 666 aaPredicted RBP19.2■□□□□ 0.66
TCOF1-206ENST00000445265 GBP3Q9H0R5 595 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 FAM160A1Q05DH4 1040 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 GCKRQ14397 625 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 TAF3Q5VWG9 929 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 FAM173BQ6P4H8 233 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 ISM2Q6H9L7 571 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 DBNDD2Q9BQY9 259 aa19.2■□□□□ 0.66
TCOF1-206ENST00000445265 CATIPQ7Z7H3 387 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 PRR36Q9H6K5 1346 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 PLBD2Q8NHP8 589 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 KLHDC4Q8TBB5 520 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 KRT23Q9C075 422 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 CNNM2Q9H8M5 875 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 ZSWIM6Q9HCJ5 1215 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 RANBP6O60518 1105 aaKnown RBP19.19■□□□□ 0.66
TCOF1-206ENST00000445265 TMTC2Q8N394 836 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 DEF6Q9H4E7 631 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 IQGAP1P46940 1657 aa19.19■□□□□ 0.66
TCOF1-206ENST00000445265 SLC9C2Q5TAH2 1124 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 GIGYF1O75420 1035 aaPredicted RBP19.18■□□□□ 0.66
TCOF1-206ENST00000445265 CDR1P51861 262 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 ME3Q16798 604 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 C19orf44Q9H6X5 657 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 EIF5P55010 431 aaKnown RBP19.18■□□□□ 0.66
TCOF1-206ENST00000445265 ZMYND15Q9H091 742 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 KDRP35968 1356 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
TCOF1-206ENST00000445265 CCDC94Q9BW85 323 aaPredicted RBP19.18■□□□□ 0.66
TCOF1-206ENST00000445265 KIF4BQ2VIQ3 1234 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 CDC37L1Q7L3B6 337 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 CHST3Q7LGC8 479 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 KIAA1210Q9ULL0 1709 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 UNC5CLQ8IV45 518 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 LSG1Q9H089 658 aaKnown RBP19.17■□□□□ 0.66
TCOF1-206ENST00000445265 MTMR6Q9Y217 621 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 EYA2O00167 538 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 ATP5JP18859 108 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 PTH1RQ03431 593 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 BMS1Q14692 1282 aaKnown RBP19.17■□□□□ 0.66
TCOF1-206ENST00000445265 MYRIPQ8NFW9 859 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 SPDYE4A6NLX3 237 aa19.17■□□□□ 0.66
TCOF1-206ENST00000445265 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
TCOF1-206ENST00000445265 WTAPQ15007 396 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms