RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GGA1Q9UJY5 639 aa13.57□□□□□ -0.24
HDAC6-211ENST00000443563 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
HDAC6-211ENST00000443563 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 ATP2B4P23634 1241 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 LDHAL6AQ6ZMR3 332 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 ZNF784Q8NCA9 323 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-211ENST00000443563 MEIS3Q99687 375 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 MINPP1Q9UNW1 487 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
HDAC6-211ENST00000443563 DUOX1Q9NRD9 1551 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 GLTPD2A6NH11 291 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 GNAI2P04899 355 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 KIAA2012Q0VF49 1180 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 WASHC4Q2M389 1173 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 ITPRIPQ8IWB1 547 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 NIM1KQ8IY84 436 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 ANKRD44Q8N8A2 993 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 GPBP1L1Q9HC44 474 aaPredicted RBP13.55□□□□□ -0.24
HDAC6-211ENST00000443563 CNNM1Q9NRU3 951 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 LEMD3Q9Y2U8 911 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
HDAC6-211ENST00000443563 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
HDAC6-211ENST00000443563 UFL1O94874 794 aa13.54□□□□□ -0.24
HDAC6-211ENST00000443563 EIF6P56537 245 aaKnown RBP13.54□□□□□ -0.24
HDAC6-211ENST00000443563 AOC3Q16853 763 aa13.54□□□□□ -0.24
HDAC6-211ENST00000443563 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
HDAC6-211ENST00000443563 ZC3H12CQ9C0D7 883 aaKnown RBP13.54□□□□□ -0.24
HDAC6-211ENST00000443563 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
HDAC6-211ENST00000443563 POLLQ9UGP5 575 aa13.54□□□□□ -0.24
HDAC6-211ENST00000443563 G3V3G9 751 aa13.53□□□□□ -0.24
HDAC6-211ENST00000443563 FZD9O00144 591 aa13.53□□□□□ -0.24
HDAC6-211ENST00000443563 KCNJ4P48050 445 aa13.53□□□□□ -0.24
HDAC6-211ENST00000443563 DCAF8Q5TAQ9 597 aa13.53□□□□□ -0.24
HDAC6-211ENST00000443563 ZNF526Q8TF50 670 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-211ENST00000443563 RLBP1P12271 317 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 CHRNDQ07001 517 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 PDE3AQ14432 1141 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 ZNF594Q96JF6 807 aaPredicted RBP13.52□□□□□ -0.25
HDAC6-211ENST00000443563 FBXO3Q9UK99 471 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 ZNRF3Q9ULT6 936 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 MROH5Q6ZUA9 1318 aa13.52□□□□□ -0.25
HDAC6-211ENST00000443563 WDR90Q96KV7 1748 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 ZNF804BA4D1E1 1349 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 RIMBP2O15034 1052 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 ZBTB7BO15156 539 aaPredicted RBP13.51□□□□□ -0.25
HDAC6-211ENST00000443563 MTX1Q13505 466 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 MVPQ14764 893 aaKnown RBP13.51□□□□□ -0.25
HDAC6-211ENST00000443563 GPC2Q8N158 579 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 PANK1Q8TE04 598 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 DDX19BQ9UMR2 479 aa13.51□□□□□ -0.25
HDAC6-211ENST00000443563 SCN4AP35499 1836 aa13.5□□□□□ -0.25
HDAC6-211ENST00000443563 PLIN1O60240 522 aa13.5□□□□□ -0.25
HDAC6-211ENST00000443563 TNIP1Q15025 636 aa13.5□□□□□ -0.25
HDAC6-211ENST00000443563 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
HDAC6-211ENST00000443563 COL4A5P29400 1685 aa13.5□□□□□ -0.25
HDAC6-211ENST00000443563 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
HDAC6-211ENST00000443563 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-211ENST00000443563 RFX5P48382 616 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-211ENST00000443563 PTPN12Q05209 780 aaKnown RBP13.49□□□□□ -0.25
HDAC6-211ENST00000443563 METTL24Q5JXM2 366 aa13.49□□□□□ -0.25
HDAC6-211ENST00000443563 ZNF541Q9H0D2 1346 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 EYA2O00167 538 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 ECE2O60344 883 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 TAF5LO75529 589 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 CIAO1O76071 339 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 DDNO94850 711 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 UBE4AQ14139 1066 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 C15orf52Q6ZUT6 534 aaKnown RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 PODNQ7Z5L7 613 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
HDAC6-211ENST00000443563 DBNDD1Q9H9R9 158 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 COG6Q9Y2V7 657 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 PSME4Q14997 1843 aa13.48□□□□□ -0.25
HDAC6-211ENST00000443563 IL15P40933 162 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-211ENST00000443563 CXCL9Q07325 125 aa13.47□□□□□ -0.25
HDAC6-211ENST00000443563 DOK7Q18PE1 504 aa13.47□□□□□ -0.25
HDAC6-211ENST00000443563 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
HDAC6-211ENST00000443563 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
HDAC6-211ENST00000443563 GPR101Q96P66 508 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-211ENST00000443563 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
HDAC6-211ENST00000443563 PDE8BO95263 885 aa13.46□□□□□ -0.25
HDAC6-211ENST00000443563 LMOD1P29536 600 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-211ENST00000443563 RRP1P56182 461 aaKnown RBP13.46□□□□□ -0.25
HDAC6-211ENST00000443563 ATP8B2P98198 1209 aa13.46□□□□□ -0.25
HDAC6-211ENST00000443563 ZNF804AQ7Z570 1209 aa13.46□□□□□ -0.25
HDAC6-211ENST00000443563 NMRK2Q9NPI5 230 aa13.46□□□□□ -0.25
HDAC6-211ENST00000443563 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
HDAC6-211ENST00000443563 RAD17O75943 681 aa13.45□□□□□ -0.26
HDAC6-211ENST00000443563 PUM3Q15397 648 aaKnown RBP13.45□□□□□ -0.26
HDAC6-211ENST00000443563 SIL1Q9H173 461 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms