RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 COL2A1P02458 1487 aaPredicted RBP10.28□□□□□ -0.76
SSXP3-201ENST00000442971 RAB3GAP2Q9H2M9 1393 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 KRT37O76014 449 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 SYN1P17600 705 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 SPRYD7Q5W111 196 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 TMC1Q8TDI8 760 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 TBC1D2BQ9UPU7 963 aa10.28□□□□□ -0.76
SSXP3-201ENST00000442971 ASTN2O75129 1339 aaPredicted RBP10.27□□□□□ -0.77
SSXP3-201ENST00000442971 TTLL12Q14166 644 aaPredicted RBP10.27□□□□□ -0.77
SSXP3-201ENST00000442971 EPHX3Q9H6B9 360 aa10.27□□□□□ -0.77
SSXP3-201ENST00000442971 FLT4P35916 1363 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 CCL5P13501 91 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 NHLH1Q02575 133 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 SLC51AQ86UW1 340 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 U2AF1L4Q8WU68 220 aaKnown RBP10.26□□□□□ -0.77
SSXP3-201ENST00000442971 RNF208Q9H0X6 261 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 SLC12A5Q9H2X9 1139 aa10.26□□□□□ -0.77
SSXP3-201ENST00000442971 KIF4BQ2VIQ3 1234 aa10.25□□□□□ -0.77
SSXP3-201ENST00000442971 NUTM1Q86Y26 1132 aa10.25□□□□□ -0.77
SSXP3-201ENST00000442971 TERF2IPQ9NYB0 399 aa10.25□□□□□ -0.77
SSXP3-201ENST00000442971 SSC5DA1L4H1 1573 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 KIF24Q5T7B8 1368 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 GPR37L1O60883 481 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 PTPN12Q05209 780 aaKnown RBP10.24□□□□□ -0.77
SSXP3-201ENST00000442971 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
SSXP3-201ENST00000442971 OTUD7BQ6GQQ9 843 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 CFAP54Q96N23 3096 aa10.24□□□□□ -0.77
SSXP3-201ENST00000442971 YDJCA8MPS7 323 aa10.23□□□□□ -0.77
SSXP3-201ENST00000442971 TCERG1O14776 1098 aaKnown RBP10.23□□□□□ -0.77
SSXP3-201ENST00000442971 SGPL1O95470 568 aa10.23□□□□□ -0.77
SSXP3-201ENST00000442971 MRPS5P82675 430 aaKnown RBP10.23□□□□□ -0.77
SSXP3-201ENST00000442971 MAP3K11Q16584 847 aa10.23□□□□□ -0.77
SSXP3-201ENST00000442971 TPTE2Q6XPS3 522 aa10.23□□□□□ -0.77
SSXP3-201ENST00000442971 NECAB3Q96P71 396 aaPredicted RBP10.23□□□□□ -0.77
SSXP3-201ENST00000442971 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
SSXP3-201ENST00000442971 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 ST20-MTHFSA0A0A6YYL1 179 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 LOC105371045A0A1W2PR82 267 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 ST18O60284 1047 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 CAMTA2O94983 1202 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 MTHFSP49914 203 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 SUPT20HQ8NEM7 779 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 EYA1Q99502 592 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 TTYH1Q9H313 450 aaPredicted RBP10.22□□□□□ -0.77
SSXP3-201ENST00000442971 THEGQ9P2T0 379 aa10.22□□□□□ -0.77
SSXP3-201ENST00000442971 TAF1P21675 1872 aa10.21□□□□□ -0.77
SSXP3-201ENST00000442971 SPDYE4A6NLX3 237 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 PRMT2P55345 433 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 KIAA2012Q0VF49 1180 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 CRY2Q49AN0 593 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 PRAMEF18Q5VWM3 479 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 PAWRQ96IZ0 340 aaKnown RBP10.21□□□□□ -0.78
SSXP3-201ENST00000442971 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 IGSF5Q9NSI5 407 aa10.21□□□□□ -0.78
SSXP3-201ENST00000442971 FAM205AQ6ZU69 1335 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 RIC1Q4ADV7 1423 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 LAMB1P07942 1786 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 TCF20Q9UGU0 1960 aaKnown RBP10.2□□□□□ -0.78
SSXP3-201ENST00000442971 SMIM22K7EJ46 135 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 PSMD14O00487 310 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 RGS20O76081 388 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 RPS12P25398 132 aaKnown RBP10.2□□□□□ -0.78
SSXP3-201ENST00000442971 KCTD2Q14681 263 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
SSXP3-201ENST00000442971 ATRXP46100 2492 aa10.2□□□□□ -0.78
SSXP3-201ENST00000442971 ZSWIM8A7E2V4 1837 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 EPG5Q9HCE0 2579 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 FAM86C2PA6NEL3 165 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 GNRH1P01148 92 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 TFRCP02786 760 aaKnown RBP10.19□□□□□ -0.78
SSXP3-201ENST00000442971 ZBTB48P10074 688 aaPredicted RBP10.19□□□□□ -0.78
SSXP3-201ENST00000442971 CAPN2P17655 700 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 GRK4P32298 578 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 SCARF1Q14162 830 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 ARMC9Q7Z3E5 817 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 NECAB2Q7Z6G3 386 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 ARHGAP39Q9C0H5 1083 aa10.19□□□□□ -0.78
SSXP3-201ENST00000442971 TMX4Q9H1E5 349 aaPredicted RBP10.19□□□□□ -0.78
SSXP3-201ENST00000442971 KMT2BQ9UMN6 2715 aaPredicted RBP10.19□□□□□ -0.78
SSXP3-201ENST00000442971 STARD3NLO95772 234 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 HOXA10P31260 410 aaPredicted RBP10.18□□□□□ -0.78
SSXP3-201ENST00000442971 NF2P35240 595 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 LDLRAD1Q5T700 205 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 ZNF530Q6P9A1 599 aaPredicted RBP10.18□□□□□ -0.78
SSXP3-201ENST00000442971 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 RPGRQ92834 1020 aaKnown RBP10.18□□□□□ -0.78
SSXP3-201ENST00000442971 BIN2Q9UBW5 565 aaPredicted RBP10.18□□□□□ -0.78
SSXP3-201ENST00000442971 SCAF8Q9UPN6 1271 aaKnown RBP10.18□□□□□ -0.78
SSXP3-201ENST00000442971 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 UNC79Q9P2D8 2635 aa10.18□□□□□ -0.78
SSXP3-201ENST00000442971 UBXN2AP68543 259 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 SLC39A6Q13433 755 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 KIF22Q14807 665 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 SLC10A4Q96EP9 437 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 PTPN18Q99952 460 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 RIPOR2Q9Y4F9 1068 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 ZFHX4Q86UP3 3567 aa10.17□□□□□ -0.78
SSXP3-201ENST00000442971 FAM177BA6PVY3 158 aa10.16□□□□□ -0.78
SSXP3-201ENST00000442971 PRR29P0C7W0 189 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms