RNA–Protein interactions for RNA: ENST00000435165.2

SGIP1-206, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SGIP1, Length 3,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-206ENST00000435165 USP54Q70EL1 1684 aa4.55□□□□□ -1.68
SGIP1-206ENST00000435165 TPM3P06753 285 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 FOSL1P15407 271 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 CLASRPQ8N2M8 674 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 CCDC102AQ96A19 550 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 UTP6Q9NYH9 597 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 DMGDHQ9UI17 866 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 RABL2BQ9UNT1 228 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 TTF2Q9UNY4 1162 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 PAXBP1Q9Y5B6 917 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 PHRF1Q9P1Y6 1649 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 TRIM6-TRIM34B2RNG4 842 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 IFRD1O00458 451 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 NBPF7P0C2Y1 421 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 RBP3P10745 1247 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 USP5P45974 858 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 KIAA2012Q0VF49 1180 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 CCDC73Q6ZRK6 1079 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 FILIP1Q7Z7B0 1213 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 RELL1Q8IUW5 271 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 ELOA2Q8IYF1 753 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 MIGA1Q8NAN2 632 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 KLHL23Q8NBE8 558 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 FMNL2Q96PY5 1086 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 ZHX3Q9H4I2 956 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 VRTNQ9H8Y1 702 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 CD248Q9HCU0 757 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 IFT57Q9NWB7 429 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 HOXC10Q9NYD6 342 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 TMCC3Q9ULS5 477 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 LMO7Q8WWI1 1683 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 ABCC11Q96J66 1382 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 SPATA31A3Q5VYP0 1347 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 S100BP04271 92 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 TAGLNQ01995 201 aaKnown RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 SOGA3Q5TF21 947 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 PMFBP1Q8TBY8 1022 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 ERCC4Q92889 916 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 ZBTB9Q96C00 473 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.54□□□□□ -1.68
SGIP1-206ENST00000435165 GJA3Q9Y6H8 435 aa4.54□□□□□ -1.68
SGIP1-206ENST00000435165 DYTNA2CJ06 578 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 KIF5CO60282 957 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 SLC34A2O95436 690 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 NBPF8Q3BBV2 869 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 NBPF14Q5TI25 921 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 KRT27Q7Z3Y8 459 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 STAG2Q8N3U4 1231 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 SMCR8Q8TEV9 937 aaPredicted RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 JDP2Q8WYK2 163 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 TANGO6Q9C0B7 1094 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 PNNQ9H307 717 aaKnown RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 MED4Q9NPJ6 270 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 GINM1Q9NU53 330 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 THRAP3Q9Y2W1 955 aaKnown RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 ANKRD30BQ9BXX2 1392 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 SHANK3Q9BYB0 1731 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 VAMP4O75379 141 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 ERCC5P28715 1186 aaPredicted RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 TSPAN7P41732 249 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 C1QTNF8P60827 252 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 CDC37L1Q7L3B6 337 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 OTUD6AQ7L8S5 288 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 CHCHD4Q8N4Q1 142 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 ERP27Q96DN0 273 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 TEX13AQ9BXU3 409 aaPredicted RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 TSPYL1Q9H0U9 437 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 ZNF644Q9H582 1327 aaPredicted RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 NRKQ7Z2Y5 1582 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 PABPN1LA6NDY0 278 aaKnown RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 PPFIA3O75145 1194 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 RNASEH2AO75792 299 aaKnown RBP4.53□□□□□ -1.68
SGIP1-206ENST00000435165 ENPP1P22413 925 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 MAGEA8P43361 318 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 NDUFAF2Q8N183 169 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 GIMAP1Q8WWP7 306 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 C8orf48Q96LL4 319 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 RMI1Q9H9A7 625 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 IP6K2Q9UHH9 426 aa4.53□□□□□ -1.68
SGIP1-206ENST00000435165 QRICH2Q9H0J4 1663 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 SBF2Q86WG5 1849 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 BOLA2-SMG1P6H3BVE0 249 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 TULP2O00295 520 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 CHL1O00533 1208 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 DCTN1Q14203 1278 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 MSL1Q68DK7 614 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 FAM196AQ6ZSG2 479 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 MTERF4Q7Z6M4 381 aaKnown RBP4.52□□□□□ -1.69
SGIP1-206ENST00000435165 NEK9Q8TD19 979 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 LZTS1Q9Y250 596 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 SLC27A2O14975 620 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 BBOX1O75936 387 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 HOXD10P28358 340 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 RAD51AP2Q09MP3 1159 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 ARMC3Q5W041 872 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 CDHR1Q96JP9 859 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 CAMKK2Q96RR4 588 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 PDGFDQ9GZP0 370 aaPredicted RBP4.52□□□□□ -1.69
SGIP1-206ENST00000435165 CLIC5Q9NZA1 410 aa4.52□□□□□ -1.69
SGIP1-206ENST00000435165 MYOM1P52179 1685 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms