RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 SCN9AQ15858 1988 aa25.81■■□□□ 1.72
HLA-B-250ENST00000434333 RTL9Q8NET4 1388 aa25.81■■□□□ 1.72
HLA-B-250ENST00000434333 ECE2O60344 883 aa25.8■■□□□ 1.72
HLA-B-250ENST00000434333 NEXNQ0ZGT2 675 aa25.8■■□□□ 1.72
HLA-B-250ENST00000434333 SPINK5Q9NQ38 1064 aaPredicted RBP25.8■■□□□ 1.72
HLA-B-250ENST00000434333 KCNQ5Q9NR82 932 aa25.8■■□□□ 1.72
HLA-B-250ENST00000434333 CNOT7Q9UIV1 285 aaKnown RBP25.8■■□□□ 1.72
HLA-B-250ENST00000434333 VAMP4O75379 141 aa25.79■■□□□ 1.72
HLA-B-250ENST00000434333 FLIIQ13045 1269 aa25.79■■□□□ 1.72
HLA-B-250ENST00000434333 DOK7Q18PE1 504 aa25.79■■□□□ 1.72
HLA-B-250ENST00000434333 CST9Q5W186 159 aa25.79■■□□□ 1.72
HLA-B-250ENST00000434333 TTLL11Q8NHH1 800 aa25.79■■□□□ 1.72
HLA-B-250ENST00000434333 CACNA1FO60840 1977 aa25.78■■□□□ 1.72
HLA-B-250ENST00000434333 UFL1O94874 794 aa25.78■■□□□ 1.72
HLA-B-250ENST00000434333 EXOSC9Q06265 439 aaKnown RBP25.78■■□□□ 1.72
HLA-B-250ENST00000434333 DEFB115Q30KQ5 88 aa25.78■■□□□ 1.72
HLA-B-250ENST00000434333 MICALL2Q8IY33 904 aa25.78■■□□□ 1.72
HLA-B-250ENST00000434333 DPF2Q92785 391 aa25.78■■□□□ 1.72
HLA-B-250ENST00000434333 H7C1W4 665 aa25.77■■□□□ 1.72
HLA-B-250ENST00000434333 ANKRD18AQ8IVF6 992 aa25.77■■□□□ 1.72
HLA-B-250ENST00000434333 GGA1Q9UJY5 639 aa25.77■■□□□ 1.72
HLA-B-250ENST00000434333 ZC3H15Q8WU90 426 aaKnown RBP25.76■■□□□ 1.71
HLA-B-250ENST00000434333 GLIS2Q9BZE0 524 aaPredicted RBP25.76■■□□□ 1.71
HLA-B-250ENST00000434333 ZC3H12CQ9C0D7 883 aaKnown RBP25.76■■□□□ 1.71
HLA-B-250ENST00000434333 GREM2Q9H772 168 aa25.76■■□□□ 1.71
HLA-B-250ENST00000434333 ANKIB1Q9P2G1 1089 aa25.76■■□□□ 1.71
HLA-B-250ENST00000434333 ABT1Q9ULW3 272 aaKnown RBP25.76■■□□□ 1.71
HLA-B-250ENST00000434333 SPEF2Q9C093 1822 aa25.76■■□□□ 1.71
HLA-B-250ENST00000434333 THSD7BQ9C0I4 1608 aa25.75■■□□□ 1.71
HLA-B-250ENST00000434333 CASP7P55210 303 aa25.75■■□□□ 1.71
HLA-B-250ENST00000434333 XDHP47989 1333 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 H7C1D1 291 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 FOXN1O15353 648 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 FKBP5Q13451 457 aaPredicted RBP25.74■■□□□ 1.71
HLA-B-250ENST00000434333 GCKRQ14397 625 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 UBE3BQ7Z3V4 1068 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 FAM9BQ8IZU0 186 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 DNAAF4Q8WXU2 420 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 CDC5LQ99459 802 aaKnown RBP25.74■■□□□ 1.71
HLA-B-250ENST00000434333 PSME4Q14997 1843 aa25.74■■□□□ 1.71
HLA-B-250ENST00000434333 WDR33Q9C0J8 1336 aaKnown RBP25.73■■□□□ 1.71
HLA-B-250ENST00000434333 EGFRP00533 1210 aa25.73■■□□□ 1.71
HLA-B-250ENST00000434333 RPS12P25398 132 aaKnown RBP25.73■■□□□ 1.71
HLA-B-250ENST00000434333 SAMD7Q7Z3H4 446 aa25.73■■□□□ 1.71
HLA-B-250ENST00000434333 PLA2G12BQ9BX93 195 aa25.73■■□□□ 1.71
HLA-B-250ENST00000434333 WTIPA6NIX2 430 aaPredicted RBP25.72■■□□□ 1.71
HLA-B-250ENST00000434333 VIL1P09327 827 aaKnown RBP25.72■■□□□ 1.71
HLA-B-250ENST00000434333 TLL2Q9Y6L7 1015 aa25.72■■□□□ 1.71
HLA-B-250ENST00000434333 LINS1Q8NG48 757 aa25.71■■□□□ 1.71
HLA-B-250ENST00000434333 BSDC1Q9NW68 430 aaPredicted RBP25.71■■□□□ 1.71
HLA-B-250ENST00000434333 WBP1LQ9NX94 342 aa25.71■■□□□ 1.71
HLA-B-250ENST00000434333 ZNF609O15014 1411 aa25.71■■□□□ 1.71
HLA-B-250ENST00000434333 ATP2B4P23634 1241 aa25.7■■□□□ 1.7
HLA-B-250ENST00000434333 TBC1D10BQ4KMP7 808 aaPredicted RBP25.7■■□□□ 1.7
HLA-B-250ENST00000434333 CDC37L1Q7L3B6 337 aa25.7■■□□□ 1.7
HLA-B-250ENST00000434333 TNS4Q8IZW8 715 aa25.7■■□□□ 1.7
HLA-B-250ENST00000434333 MINPP1Q9UNW1 487 aa25.7■■□□□ 1.7
HLA-B-250ENST00000434333 CELF2O95319 508 aaKnown RBP25.69■■□□□ 1.7
HLA-B-250ENST00000434333 MYH16Q9H6N6 1097 aa25.69■■□□□ 1.7
HLA-B-250ENST00000434333 CYP4F22Q6NT55 531 aa25.68■■□□□ 1.7
HLA-B-250ENST00000434333 CAPNS2Q96L46 248 aa25.68■■□□□ 1.7
HLA-B-250ENST00000434333 MED23Q9ULK4 1368 aa25.68■■□□□ 1.7
HLA-B-250ENST00000434333 ZNF521Q96K83 1311 aa25.67■■□□□ 1.7
HLA-B-250ENST00000434333 CSF1RP07333 972 aa25.67■■□□□ 1.7
HLA-B-250ENST00000434333 FAM161AQ3B820 660 aa25.67■■□□□ 1.7
HLA-B-250ENST00000434333 SAPCD2Q86UD0 394 aa25.67■■□□□ 1.7
HLA-B-250ENST00000434333 ZNF646O15015 1829 aaPredicted RBP25.67■■□□□ 1.7
HLA-B-250ENST00000434333 F6X3S4 739 aa25.66■■□□□ 1.7
HLA-B-250ENST00000434333 G3V3G9 751 aa25.66■■□□□ 1.7
HLA-B-250ENST00000434333 DCAF8Q5TAQ9 597 aa25.66■■□□□ 1.7
HLA-B-250ENST00000434333 DLK2Q6UY11 383 aa25.66■■□□□ 1.7
HLA-B-250ENST00000434333 ITGA6P23229 1130 aa25.65■■□□□ 1.7
HLA-B-250ENST00000434333 CCT4P50991 539 aaKnown RBP25.65■■□□□ 1.7
HLA-B-250ENST00000434333 BEND3Q5T5X7 828 aa25.65■■□□□ 1.7
HLA-B-250ENST00000434333 RSBN1LQ6PCB5 846 aaPredicted RBP25.65■■□□□ 1.7
HLA-B-250ENST00000434333 USP48Q86UV5 1035 aa25.65■■□□□ 1.7
HLA-B-250ENST00000434333 POLR2AP24928 1970 aaKnown RBP25.65■■□□□ 1.7
HLA-B-250ENST00000434333 ECE1P42892 770 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 KIF4BQ2VIQ3 1234 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 RBM26Q5T8P6 1007 aaKnown RBP25.64■■□□□ 1.7
HLA-B-250ENST00000434333 PODNQ7Z5L7 613 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 AIDAQ96BJ3 306 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 GMLQ99445 158 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 PRDM10Q9NQV6 1147 aa25.64■■□□□ 1.7
HLA-B-250ENST00000434333 IGHMBP2P38935 993 aaKnown RBP25.63■■□□□ 1.69
HLA-B-250ENST00000434333 CTCFP49711 727 aaPredicted RBP25.63■■□□□ 1.69
HLA-B-250ENST00000434333 ZNF280AP59817 542 aaPredicted RBP25.63■■□□□ 1.69
HLA-B-250ENST00000434333 PAXIP1Q6ZW49 1069 aaPredicted RBP25.63■■□□□ 1.69
HLA-B-250ENST00000434333 AGBL3Q8NEM8 1001 aa25.63■■□□□ 1.69
HLA-B-250ENST00000434333 ZNF408Q9H9D4 720 aa25.63■■□□□ 1.69
HLA-B-250ENST00000434333 MAP2K1Q02750 393 aaPredicted RBP25.62■■□□□ 1.69
HLA-B-250ENST00000434333 HHIPL1Q96JK4 782 aa25.62■■□□□ 1.69
HLA-B-250ENST00000434333 ASTN2O75129 1339 aaPredicted RBP25.62■■□□□ 1.69
HLA-B-250ENST00000434333 FOXO4P98177 505 aa25.61■■□□□ 1.69
HLA-B-250ENST00000434333 GRM1Q13255 1194 aa25.61■■□□□ 1.69
HLA-B-250ENST00000434333 KRT26Q7Z3Y9 468 aa25.61■■□□□ 1.69
HLA-B-250ENST00000434333 TXNRD3Q86VQ6 643 aa25.61■■□□□ 1.69
HLA-B-250ENST00000434333 USP17L3A6NCW0 530 aa25.6■■□□□ 1.69
HLA-B-250ENST00000434333 USP17L4A6NCW7 530 aa25.6■■□□□ 1.69
HLA-B-250ENST00000434333 ADM5C9JUS6 153 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms