RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 TBC1D9BQ66K14 1250 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
HIPK2-203ENST00000428878 MAGEB6Q8N7X4 407 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.13□□□□□ -0.31
HIPK2-203ENST00000428878 JCADQ9P266 1359 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 IL25Q9H293 177 aa13.13□□□□□ -0.31
HIPK2-203ENST00000428878 GNL3LQ9NVN8 582 aaKnown RBP13.13□□□□□ -0.31
HIPK2-203ENST00000428878 GOLGB1Q14789 3259 aaKnown RBP13.12□□□□□ -0.31
HIPK2-203ENST00000428878 RXRBP28702 533 aa13.12□□□□□ -0.31
HIPK2-203ENST00000428878 IL6STP40189 918 aaPredicted RBP13.12□□□□□ -0.31
HIPK2-203ENST00000428878 MPNDQ8N594 471 aa13.12□□□□□ -0.31
HIPK2-203ENST00000428878 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
HIPK2-203ENST00000428878 COL16A1Q07092 1604 aaPredicted RBP13.12□□□□□ -0.31
HIPK2-203ENST00000428878 ARHGEF1Q92888 912 aaKnown RBP13.12□□□□□ -0.31
HIPK2-203ENST00000428878 PRDM1O75626 825 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 ZNF589Q86UQ0 364 aaPredicted RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 BRF1Q92994 677 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 CYP7A1P22680 504 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 EN1Q05925 392 aaPredicted RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 LRRFIP1Q32MZ4 808 aaKnown RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 DZIP1Q86YF9 867 aaKnown RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
HIPK2-203ENST00000428878 NAPBQ9H115 298 aa13.11□□□□□ -0.31
HIPK2-203ENST00000428878 RASEFQ8IZ41 740 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 CPDO75976 1380 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 PCCAP05165 728 aaPredicted RBP13.1□□□□□ -0.31
HIPK2-203ENST00000428878 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 TMX3Q96JJ7 454 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
HIPK2-203ENST00000428878 RNF214Q8ND24 703 aa13.1□□□□□ -0.31
HIPK2-203ENST00000428878 HIP1O00291 1037 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 MAP3K12Q12852 859 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 SCARF1Q14162 830 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 ARMT1Q9H993 441 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 H7C1W4 665 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 DCCP43146 1447 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 PHRF1Q9P1Y6 1649 aaKnown RBP13.09□□□□□ -0.31
HIPK2-203ENST00000428878 PKP1Q13835 747 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 ADCK5Q3MIX3 580 aa13.09□□□□□ -0.31
HIPK2-203ENST00000428878 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
HIPK2-203ENST00000428878 POLA2Q14181 598 aa13.08□□□□□ -0.31
HIPK2-203ENST00000428878 VPS72Q15906 364 aa13.08□□□□□ -0.31
HIPK2-203ENST00000428878 OVOS2A0A0G2JMS6 1433 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 PSMA5P28066 241 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 ST5P78524 1137 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 CHRNDQ07001 517 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 PICALMQ13492 652 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 CAVIN1Q6NZI2 390 aaKnown RBP13.08□□□□□ -0.32
HIPK2-203ENST00000428878 MICU3Q86XE3 530 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 FOXO4P98177 505 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
HIPK2-203ENST00000428878 TFIP11Q9UBB9 837 aaKnown RBP13.08□□□□□ -0.32
HIPK2-203ENST00000428878 ZNF213O14771 459 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 SGSM2O43147 1006 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 UFL1O94874 794 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 AK2P54819 239 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
HIPK2-203ENST00000428878 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
HIPK2-203ENST00000428878 LARP1BQ659C4 914 aaKnown RBP13.07□□□□□ -0.32
HIPK2-203ENST00000428878 CCDC102BQ68D86 513 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 MBD4O95243 580 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 USP5P45974 858 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 SYNE3Q6ZMZ3 975 aa13.07□□□□□ -0.32
HIPK2-203ENST00000428878 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
HIPK2-203ENST00000428878 ZRSR1Q15695 479 aaKnown RBP13.06□□□□□ -0.32
HIPK2-203ENST00000428878 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
HIPK2-203ENST00000428878 TNPO1Q92973 898 aaKnown RBP13.06□□□□□ -0.32
HIPK2-203ENST00000428878 NCOA5Q9HCD5 579 aaKnown RBP13.06□□□□□ -0.32
HIPK2-203ENST00000428878 THRAP3Q9Y2W1 955 aaKnown RBP13.06□□□□□ -0.32
HIPK2-203ENST00000428878 SLC4A4Q9Y6R1 1079 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 ATP10DQ9P241 1426 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 TTC41PQ6P2S7 1318 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 TRAK2O60296 914 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 SDR42E1Q8WUS8 393 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 DLG5Q8TDM6 1919 aa13.06□□□□□ -0.32
HIPK2-203ENST00000428878 ERICH2A1L162 156 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 INTS5Q6P9B9 1019 aaKnown RBP13.05□□□□□ -0.32
HIPK2-203ENST00000428878 OLFM4Q6UX06 510 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 SLC51AQ86UW1 340 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 NFAT5O94916 1531 aa13.05□□□□□ -0.32
HIPK2-203ENST00000428878 TXNRD1Q16881 649 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms