RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CCT4P50991 539 aaKnown RBP21.74■■□□□ 1.07
LMCD1-204ENST00000426878 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
LMCD1-204ENST00000426878 KAZALD1Q96I82 304 aa21.74■■□□□ 1.07
LMCD1-204ENST00000426878 USP44Q9H0E7 712 aa21.74■■□□□ 1.07
LMCD1-204ENST00000426878 SCN4AP35499 1836 aa21.74■■□□□ 1.07
LMCD1-204ENST00000426878 ANKRD18BA2A2Z9 1011 aa21.73■■□□□ 1.07
LMCD1-204ENST00000426878 IQCA1LA6NCM1 817 aa21.73■■□□□ 1.07
LMCD1-204ENST00000426878 IFIT5Q13325 482 aaKnown RBP21.73■■□□□ 1.07
LMCD1-204ENST00000426878 SUCLG2Q96I99 432 aa21.73■■□□□ 1.07
LMCD1-204ENST00000426878 GGA1Q9UJY5 639 aa21.73■■□□□ 1.07
LMCD1-204ENST00000426878 IPO8O15397 1037 aaKnown RBP21.72■■□□□ 1.07
LMCD1-204ENST00000426878 UFL1O94874 794 aa21.72■■□□□ 1.07
LMCD1-204ENST00000426878 ATP2B4P23634 1241 aa21.72■■□□□ 1.07
LMCD1-204ENST00000426878 MPHOSPH8Q99549 860 aa21.72■■□□□ 1.07
LMCD1-204ENST00000426878 CXCL9Q07325 125 aa21.71■■□□□ 1.07
LMCD1-204ENST00000426878 FSTL1Q12841 308 aa21.71■■□□□ 1.07
LMCD1-204ENST00000426878 CCDC57Q2TAC2 916 aa21.71■■□□□ 1.07
LMCD1-204ENST00000426878 RABL6Q3YEC7 729 aaPredicted RBP21.71■■□□□ 1.07
LMCD1-204ENST00000426878 ZC3H12CQ9C0D7 883 aaKnown RBP21.71■■□□□ 1.07
LMCD1-204ENST00000426878 SPEF2Q9C093 1822 aa21.7■■□□□ 1.06
LMCD1-204ENST00000426878 BCAR3O75815 825 aa21.7■■□□□ 1.06
LMCD1-204ENST00000426878 ANKRD2Q9GZV1 360 aa21.7■■□□□ 1.06
LMCD1-204ENST00000426878 CHMP3Q9Y3E7 222 aa21.7■■□□□ 1.06
LMCD1-204ENST00000426878 RIMBP2O15034 1052 aa21.69■■□□□ 1.06
LMCD1-204ENST00000426878 TAF1DQ9H5J8 278 aaPredicted RBP21.69■■□□□ 1.06
LMCD1-204ENST00000426878 HACL1Q9UJ83 578 aa21.69■■□□□ 1.06
LMCD1-204ENST00000426878 LEMD3Q9Y2U8 911 aa21.69■■□□□ 1.06
LMCD1-204ENST00000426878 GJA3Q9Y6H8 435 aa21.69■■□□□ 1.06
LMCD1-204ENST00000426878 YDJCA8MPS7 323 aa21.68■■□□□ 1.06
LMCD1-204ENST00000426878 TNIP1Q15025 636 aa21.68■■□□□ 1.06
LMCD1-204ENST00000426878 INTS3Q68E01 1043 aaKnown RBP21.68■■□□□ 1.06
LMCD1-204ENST00000426878 CIAPIN1Q6FI81 312 aa21.68■■□□□ 1.06
LMCD1-204ENST00000426878 SMC1BQ8NDV3 1235 aa21.68■■□□□ 1.06
LMCD1-204ENST00000426878 BICC1Q9H694 974 aaKnown RBP21.68■■□□□ 1.06
LMCD1-204ENST00000426878 ATF7IPQ6VMQ6 1270 aa21.67■■□□□ 1.06
LMCD1-204ENST00000426878 ANKRD44Q8N8A2 993 aa21.67■■□□□ 1.06
LMCD1-204ENST00000426878 GPR101Q96P66 508 aaPredicted RBP21.67■■□□□ 1.06
LMCD1-204ENST00000426878 TRIM27P14373 513 aa21.66■■□□□ 1.06
LMCD1-204ENST00000426878 SCNN1DP51172 638 aa21.66■■□□□ 1.06
LMCD1-204ENST00000426878 DBNDD1Q9H9R9 158 aa21.66■■□□□ 1.06
LMCD1-204ENST00000426878 MED23Q9ULK4 1368 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 ECE2O60344 883 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 RAD17O75943 681 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 EPHX2P34913 555 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 CHRNDQ07001 517 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 HDAC5Q9UQL6 1122 aa21.65■■□□□ 1.06
LMCD1-204ENST00000426878 HSPA6P17066 643 aa21.64■■□□□ 1.06
LMCD1-204ENST00000426878 DOK7Q18PE1 504 aa21.64■■□□□ 1.06
LMCD1-204ENST00000426878 TAF7LQ5H9L4 462 aa21.64■■□□□ 1.06
LMCD1-204ENST00000426878 LDHAL6AQ6ZMR3 332 aa21.64■■□□□ 1.06
LMCD1-204ENST00000426878 PNMA8AQ86V59 439 aaPredicted RBP21.64■■□□□ 1.06
LMCD1-204ENST00000426878 ZNF804BA4D1E1 1349 aa21.64■■□□□ 1.05
LMCD1-204ENST00000426878 WTIPA6NIX2 430 aaPredicted RBP21.63■■□□□ 1.05
LMCD1-204ENST00000426878 UBTFL1P0CB47 393 aaPredicted RBP21.63■■□□□ 1.05
LMCD1-204ENST00000426878 LMOD1P29536 600 aaPredicted RBP21.63■■□□□ 1.05
LMCD1-204ENST00000426878 FRAT1Q92837 279 aaPredicted RBP21.63■■□□□ 1.05
LMCD1-204ENST00000426878 ZNF594Q96JF6 807 aaPredicted RBP21.63■■□□□ 1.05
LMCD1-204ENST00000426878 ZKSCAN2Q63HK3 967 aa21.63■■□□□ 1.05
LMCD1-204ENST00000426878 PODNQ7Z5L7 613 aa21.63■■□□□ 1.05
LMCD1-204ENST00000426878 LDHDQ86WU2 507 aa21.63■■□□□ 1.05
LMCD1-204ENST00000426878 GPRC5DQ9NZD1 345 aa21.63■■□□□ 1.05
LMCD1-204ENST00000426878 CEP350Q5VT06 3117 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 G3V3G9 751 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 EPS15P42566 896 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
LMCD1-204ENST00000426878 DCAF8Q5TAQ9 597 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 CNNM1Q9NRU3 951 aa21.62■■□□□ 1.05
LMCD1-204ENST00000426878 PSMD14O00487 310 aa21.61■■□□□ 1.05
LMCD1-204ENST00000426878 POTEIP0CG38 1075 aa21.61■■□□□ 1.05
LMCD1-204ENST00000426878 POTEJP0CG39 1038 aa21.61■■□□□ 1.05
LMCD1-204ENST00000426878 C15orf52Q6ZUT6 534 aaKnown RBP21.61■■□□□ 1.05
LMCD1-204ENST00000426878 DPF2Q92785 391 aa21.61■■□□□ 1.05
LMCD1-204ENST00000426878 KCNQ5Q9NR82 932 aa21.61■■□□□ 1.05
LMCD1-204ENST00000426878 SCN9AQ15858 1988 aa21.6■■□□□ 1.05
LMCD1-204ENST00000426878 VIL1P09327 827 aaKnown RBP21.6■■□□□ 1.05
LMCD1-204ENST00000426878 RPS12P25398 132 aaKnown RBP21.6■■□□□ 1.05
LMCD1-204ENST00000426878 USP50Q70EL3 339 aaPredicted RBP21.6■■□□□ 1.05
LMCD1-204ENST00000426878 MEIS3Q99687 375 aa21.6■■□□□ 1.05
LMCD1-204ENST00000426878 RIPOR2Q9Y4F9 1068 aa21.6■■□□□ 1.05
LMCD1-204ENST00000426878 A0A1B0GUL6 1792 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 ADAMTSL1Q8N6G6 1762 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 TAF5LO75529 589 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 GNAI3P08754 354 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 KCNJ4P48050 445 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 TXNRD3Q86VQ6 643 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 COA1Q9GZY4 146 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 ADARB2Q9NS39 739 aaKnown RBP21.59■■□□□ 1.05
LMCD1-204ENST00000426878 TNNQ9UQP3 1299 aa21.59■■□□□ 1.05
LMCD1-204ENST00000426878 IRS2Q9Y4H2 1338 aa21.58■■□□□ 1.05
LMCD1-204ENST00000426878 ZNF609O15014 1411 aa21.58■■□□□ 1.05
LMCD1-204ENST00000426878 EAPPQ56P03 285 aaPredicted RBP21.58■■□□□ 1.05
LMCD1-204ENST00000426878 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
LMCD1-204ENST00000426878 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
LMCD1-204ENST00000426878 PSME4Q14997 1843 aa21.58■■□□□ 1.04
LMCD1-204ENST00000426878 RFX5P48382 616 aaPredicted RBP21.57■■□□□ 1.04
LMCD1-204ENST00000426878 APLP1P51693 650 aa21.57■■□□□ 1.04
LMCD1-204ENST00000426878 CLUAP1Q96AJ1 413 aa21.57■■□□□ 1.04
LMCD1-204ENST00000426878 MROH5Q6ZUA9 1318 aa21.57■■□□□ 1.04
LMCD1-204ENST00000426878 KLRK1P26718 216 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms