RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 ZNF853P0CG23 659 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 BMP1P13497 986 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 TRIM27P14373 513 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 PRKAR2BP31323 418 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 DEKP35659 375 aaKnown RBP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 RIPK4P57078 832 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 NR5A1Q13285 461 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 ARID5BQ14865 1188 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 AGERQ15109 404 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 NFE2L2Q16236 605 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 LCE2CQ5TA81 110 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 NBPF14Q5TI25 921 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 DZIP1LQ8IYY4 767 aaKnown RBP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 FRAT1Q92837 279 aaPredicted RBP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 NUDT16Q96DE0 195 aaKnown RBP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 ITPKCQ96DU7 683 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 PHACTR3Q96KR7 559 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 TRIM47Q96LD4 638 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 ZFAND3Q9H8U3 227 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 SPON1Q9HCB6 807 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 GDPD2Q9HCC8 539 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 MAP4K5Q9Y4K4 846 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 LAS1LQ9Y4W2 734 aaKnown RBP3.48□□□□□ -1.85
LINC00407-201ENST00000426509 EMILIN1Q9Y6C2 1016 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 USP31Q70CQ4 1352 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 PIK3R4Q99570 1358 aa3.48□□□□□ -1.85
LINC00407-201ENST00000426509 PXDNQ92626 1479 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 XRN1Q8IZH2 1706 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 ZC3H4Q9UPT8 1303 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 MAP2P11137 1827 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 DLG5Q8TDM6 1919 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 FAM83GA6ND36 823 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 FAM181BA6NEQ2 426 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 FOXO3O43524 673 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 ZBTB7AO95365 584 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 APBA3O96018 575 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 WDR4P57081 412 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 ALDH1L2Q3SY69 923 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 TMEM57Q8N5G2 664 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 PMFBP1Q8TBY8 1022 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 ZFP42Q96MM3 310 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 ARHGAP9Q9BRR9 750 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 SYT17Q9BSW7 474 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 THUMPD2Q9BTF0 503 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 FHDC1Q9C0D6 1143 aaPredicted RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 SMC4Q9NTJ3 1288 aa3.47□□□□□ -1.85
LINC00407-201ENST00000426509 NOB1Q9ULX3 412 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 CCDC9Q9Y3X0 531 aaKnown RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 COL22A1Q8NFW1 1626 aaPredicted RBP3.47□□□□□ -1.85
LINC00407-201ENST00000426509 TTC21BQ7Z4L5 1316 aa3.46□□□□□ -1.85
LINC00407-201ENST00000426509 KIF16BQ96L93 1317 aa3.46□□□□□ -1.85
LINC00407-201ENST00000426509 CEP350Q5VT06 3117 aa3.46□□□□□ -1.85
LINC00407-201ENST00000426509 USP6P35125 1406 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 PPM1GO15355 546 aaPredicted RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 VAMP4O75379 141 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ZIC2O95409 532 aaPredicted RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 HMOX1P09601 288 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 HSPA6P17066 643 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ABL2P42684 1182 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 NFX1Q12986 1120 aaKnown RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 HDAC1Q13547 482 aaPredicted RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 IRF5Q13568 498 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 RRS1Q15050 365 aaKnown RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ATF7IPQ6VMQ6 1270 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 VASH1Q7L8A9 365 aaPredicted RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 PTF1AQ7RTS3 328 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 SMC5Q8IY18 1101 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 DNAJC5GQ8N7S2 189 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 TSPYL6Q8N831 410 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ADAM32Q8TC27 787 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 COG3Q96JB2 828 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 PNNQ9H307 717 aaKnown RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 RWDD1Q9H446 243 aaPredicted RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 MBIPQ9NS73 344 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ZBTB40Q9NUA8 1239 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 IFT57Q9NWB7 429 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 GPSM3Q9Y4H4 160 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 NDUFB9Q9Y6M9 179 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 MARF1Q9Y4F3 1742 aaKnown RBP3.46□□□□□ -1.86
LINC00407-201ENST00000426509 USP54Q70EL1 1684 aa3.46□□□□□ -1.86
LINC00407-201ENST00000426509 ABCC4O15439 1325 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 SHANK3Q9BYB0 1731 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 TNS1Q9HBL0 1735 aaKnown RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 NEFMP07197 916 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 FSHRP23945 695 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 PRELPP51888 382 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 PTK2Q05397 1052 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 EIF4A2Q14240 407 aaKnown RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 ESCO1Q5FWF5 840 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 PPP1R26Q5T8A7 1209 aaPredicted RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 MRPL14Q6P1L8 145 aaKnown RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 AEBP1Q8IUX7 1158 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 ITPRIPQ8IWB1 547 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 FTSJ3Q8IY81 847 aaKnown RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 KIFC2Q96AC6 838 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 ZNF428Q96B54 188 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 TBC1D32Q96NH3 1257 aa3.45□□□□□ -1.86
LINC00407-201ENST00000426509 KCTD15Q96SI1 283 aaPredicted RBP3.45□□□□□ -1.86
LINC00407-201ENST00000426509 ZMYND15Q9H091 742 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms