RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CWC27Q6UX04 472 aaKnown RBP18.43■□□□□ 0.54
ACTB-204ENST00000425660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
ACTB-204ENST00000425660 XAGE2Q96GT9 111 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 RAD50Q92878 1312 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 PHF14O94880 888 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 RABEP1Q15276 862 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 BICDL1Q6ZP65 573 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 FSD1Q9BTV5 496 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
ACTB-204ENST00000425660 ANAPC15P60006 121 aa18.41■□□□□ 0.54
ACTB-204ENST00000425660 ATP2B3Q16720 1220 aa18.41■□□□□ 0.54
ACTB-204ENST00000425660 TPTE2Q6XPS3 522 aa18.41■□□□□ 0.54
ACTB-204ENST00000425660 NBPF5PQ86XG9 351 aaPredicted RBP18.41■□□□□ 0.54
ACTB-204ENST00000425660 CARMIL3Q8ND23 1372 aa18.4■□□□□ 0.54
ACTB-204ENST00000425660 CCDC158Q5M9N0 1113 aa18.4■□□□□ 0.54
ACTB-204ENST00000425660 ZNF512BQ96KM6 892 aaPredicted RBP18.4■□□□□ 0.54
ACTB-204ENST00000425660 MPHOSPH8Q99549 860 aa18.4■□□□□ 0.54
ACTB-204ENST00000425660 LSG1Q9H089 658 aaKnown RBP18.4■□□□□ 0.54
ACTB-204ENST00000425660 SPEF2Q9C093 1822 aa18.4■□□□□ 0.54
ACTB-204ENST00000425660 FGFR2P21802 821 aa18.39■□□□□ 0.54
ACTB-204ENST00000425660 MCCP23508 829 aa18.39■□□□□ 0.54
ACTB-204ENST00000425660 C3orf67Q6ZVT6 689 aa18.39■□□□□ 0.54
ACTB-204ENST00000425660 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.54
ACTB-204ENST00000425660 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.54
ACTB-204ENST00000425660 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.54
ACTB-204ENST00000425660 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
ACTB-204ENST00000425660 ADORA1P30542 326 aa18.39■□□□□ 0.53
ACTB-204ENST00000425660 HSPA4P34932 840 aa18.39■□□□□ 0.53
ACTB-204ENST00000425660 IGHMBP2P38935 993 aaKnown RBP18.39■□□□□ 0.53
ACTB-204ENST00000425660 PUM3Q15397 648 aaKnown RBP18.39■□□□□ 0.53
ACTB-204ENST00000425660 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
ACTB-204ENST00000425660 PAG1Q9NWQ8 432 aa18.39■□□□□ 0.53
ACTB-204ENST00000425660 IFIT1P09914 478 aaKnown RBP18.38■□□□□ 0.53
ACTB-204ENST00000425660 NFIXQ14938 502 aa18.38■□□□□ 0.53
ACTB-204ENST00000425660 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
ACTB-204ENST00000425660 LPIN2Q92539 896 aa18.38■□□□□ 0.53
ACTB-204ENST00000425660 FAM227BQ96M60 508 aa18.38■□□□□ 0.53
ACTB-204ENST00000425660 MED23Q9ULK4 1368 aa18.38■□□□□ 0.53
ACTB-204ENST00000425660 GYS1P13807 737 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 NMIQ13287 307 aaPredicted RBP18.37■□□□□ 0.53
ACTB-204ENST00000425660 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 GORABQ5T7V8 394 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 KIAA1211Q6ZU35 1233 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 NLRP3Q96P20 1036 aa18.37■□□□□ 0.53
ACTB-204ENST00000425660 COL4A1P02462 1669 aa18.36■□□□□ 0.53
ACTB-204ENST00000425660 A0A0D9SFI3 127 aa18.36■□□□□ 0.53
ACTB-204ENST00000425660 APBA3O96018 575 aa18.36■□□□□ 0.53
ACTB-204ENST00000425660 TTC39AQ5SRH9 613 aa18.36■□□□□ 0.53
ACTB-204ENST00000425660 DDX46Q7L014 1031 aaKnown RBP18.36■□□□□ 0.53
ACTB-204ENST00000425660 BSDC1Q9NW68 430 aaPredicted RBP18.36■□□□□ 0.53
ACTB-204ENST00000425660 ARAP2Q8WZ64 1704 aa18.36■□□□□ 0.53
ACTB-204ENST00000425660 GOLIM4O00461 696 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
ACTB-204ENST00000425660 PALD1Q9ULE6 856 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 RGPD3A6NKT7 1758 aaPredicted RBP18.35■□□□□ 0.53
ACTB-204ENST00000425660 RGPD4Q7Z3J3 1758 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 ANKRD18AQ8IVF6 992 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
ACTB-204ENST00000425660 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
ACTB-204ENST00000425660 TM4SF1P30408 202 aa18.34■□□□□ 0.53
ACTB-204ENST00000425660 ILDR2Q71H61 639 aa18.34■□□□□ 0.53
ACTB-204ENST00000425660 TNS1Q9HBL0 1735 aaKnown RBP18.34■□□□□ 0.53
ACTB-204ENST00000425660 ARID4AP29374 1257 aaPredicted RBP18.33■□□□□ 0.53
ACTB-204ENST00000425660 CHRNDQ07001 517 aa18.33■□□□□ 0.53
ACTB-204ENST00000425660 SCARF1Q14162 830 aa18.33■□□□□ 0.53
ACTB-204ENST00000425660 MAP4K1Q92918 833 aa18.33■□□□□ 0.53
ACTB-204ENST00000425660 KCNB2Q92953 911 aa18.33■□□□□ 0.53
ACTB-204ENST00000425660 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.52
ACTB-204ENST00000425660 SLC5A1P13866 664 aa18.33■□□□□ 0.52
ACTB-204ENST00000425660 PTH1RQ03431 593 aa18.33■□□□□ 0.52
ACTB-204ENST00000425660 CCDC102BQ68D86 513 aa18.33■□□□□ 0.52
ACTB-204ENST00000425660 CNBD1Q8NA66 436 aa18.33■□□□□ 0.52
ACTB-204ENST00000425660 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.52
ACTB-204ENST00000425660 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.52
ACTB-204ENST00000425660 ST18O60284 1047 aa18.32■□□□□ 0.52
ACTB-204ENST00000425660 MCAMP43121 646 aa18.32■□□□□ 0.52
ACTB-204ENST00000425660 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
ACTB-204ENST00000425660 TAF5LO75529 589 aa18.31■□□□□ 0.52
ACTB-204ENST00000425660 UQCRFS1P1P0C7P4 283 aa18.31■□□□□ 0.52
ACTB-204ENST00000425660 FKBP4Q02790 459 aaKnown RBP eCLIP18.31■□□□□ 0.522e-6■■□□□ 13.5
ACTB-204ENST00000425660 NECTIN1Q15223 517 aa18.31■□□□□ 0.52
ACTB-204ENST00000425660 MCMDC2Q4G0Z9 681 aa18.31■□□□□ 0.52
ACTB-204ENST00000425660 ZNF589Q86UQ0 364 aaPredicted RBP18.31■□□□□ 0.52
ACTB-204ENST00000425660 CELF1Q92879 486 aaKnown RBP18.31■□□□□ 0.52
ACTB-204ENST00000425660 TNRC6CQ9HCJ0 1690 aaKnown RBP18.3■□□□□ 0.52
ACTB-204ENST00000425660 RPS8P62241 208 aaKnown RBP18.3■□□□□ 0.52
ACTB-204ENST00000425660 LRRFIP1Q32MZ4 808 aaKnown RBP18.3■□□□□ 0.52
ACTB-204ENST00000425660 PRR5LQ6MZQ0 368 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 ZAP70P43403 619 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 PHKA1P46020 1223 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 TFCP2L1Q9NZI6 479 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 SNX14Q9Y5W7 946 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 AKAP11Q9UKA4 1901 aa18.3■□□□□ 0.52
ACTB-204ENST00000425660 CHGBP05060 677 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms