RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 DRC7Q8IY82 874 aa16.99■□□□□ 0.31
MSH5-206ENST00000423982 CBX8Q9HC52 389 aa16.99■□□□□ 0.31
MSH5-206ENST00000423982 ATG3Q9NT62 314 aa16.99■□□□□ 0.31
MSH5-206ENST00000423982 MRC1P22897 1456 aa16.99■□□□□ 0.31
MSH5-206ENST00000423982 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
MSH5-206ENST00000423982 CREB3L3Q68CJ9 461 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 DNAAF4Q8WXU2 420 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 ANKRD7Q92527 254 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 PXDNLA1KZ92 1463 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 PLEKHG2Q9H7P9 1386 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 KCNQ4P56696 695 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 KRT85P78386 507 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 TNMDQ9H2S6 317 aa16.98■□□□□ 0.31
MSH5-206ENST00000423982 CCDC171Q6TFL3 1326 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 UTP14CQ5TAP6 766 aaKnown RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 CLASRPQ8N2M8 674 aaKnown RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 SH2B1Q9NRF2 756 aaPredicted RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 N4BP2Q86UW6 1770 aaPredicted RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 A1BGP04217 495 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 NCBP1Q09161 790 aaKnown RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 ECHDC1Q9NTX5 307 aa16.97■□□□□ 0.31
MSH5-206ENST00000423982 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
MSH5-206ENST00000423982 CTIFO43310 598 aaKnown RBP16.96■□□□□ 0.31
MSH5-206ENST00000423982 CCDC8Q9H0W5 538 aaPredicted RBP16.96■□□□□ 0.31
MSH5-206ENST00000423982 GLI3P10071 1580 aa16.96■□□□□ 0.31
MSH5-206ENST00000423982 NR1I2O75469 434 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 AACSQ86V21 672 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 DNAJC25Q9H1X3 360 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.3
MSH5-206ENST00000423982 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 HEG1Q9ULI3 1381 aa16.96■□□□□ 0.3
MSH5-206ENST00000423982 A0A087WWV3 80 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
MSH5-206ENST00000423982 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
MSH5-206ENST00000423982 CCDC144BQ3MJ40 725 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 CCDC144CPQ8IYA2 1237 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 C5P01031 1676 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 SLC27A2O14975 620 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 HOXB7P09629 217 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
MSH5-206ENST00000423982 ARID5BQ14865 1188 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 SPATA32Q96LK8 384 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 ADCY9O60503 1353 aa16.95■□□□□ 0.3
MSH5-206ENST00000423982 BCL9O00512 1426 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 DOT1LQ8TEK3 1739 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 TM6SF1Q9BZW5 370 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 USP42Q9H9J4 1324 aaKnown RBP16.94■□□□□ 0.3
MSH5-206ENST00000423982 JAK2O60674 1132 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 CACTINQ8WUQ7 758 aaKnown RBP16.94■□□□□ 0.3
MSH5-206ENST00000423982 PGBD1Q96JS3 809 aa16.94■□□□□ 0.3
MSH5-206ENST00000423982 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 TPM3P06753 285 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 ZNF75DP51815 510 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 PDIA6Q15084 440 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 LEO1Q8WVC0 666 aaPredicted RBP16.93■□□□□ 0.3
MSH5-206ENST00000423982 KCNB2Q92953 911 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 EDC3Q96F86 508 aaKnown RBP16.93■□□□□ 0.3
MSH5-206ENST00000423982 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 CHGBP05060 677 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 TNNT1P13805 278 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 BOLA2Q9H3K6 86 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 ATRNO75882 1429 aa16.93■□□□□ 0.3
MSH5-206ENST00000423982 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
MSH5-206ENST00000423982 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
MSH5-206ENST00000423982 KLHDC4Q8TBB5 520 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 ZNF592Q92610 1267 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 EAF2Q96CJ1 260 aaPredicted RBP16.92■□□□□ 0.3
MSH5-206ENST00000423982 SIL1Q9H173 461 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
MSH5-206ENST00000423982 ITGB4P16144 1822 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
MSH5-206ENST00000423982 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
MSH5-206ENST00000423982 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 ZNF165P49910 485 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 FOSBP53539 338 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 HSP90AB4PQ58FF6 505 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 PLA2G4DQ86XP0 818 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 BICD2Q8TD16 824 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 DDX21Q9NR30 783 aaKnown RBP eCLIP16.91■□□□□ 0.3
MSH5-206ENST00000423982 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 USP27XA6NNY8 438 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 SASH1O94885 1247 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 NDUFB9Q9Y6M9 179 aa16.91■□□□□ 0.3
MSH5-206ENST00000423982 ELP1O95163 1332 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms