RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 GPR101Q96P66 508 aaPredicted RBP20.81■□□□□ 0.92
COL18A1-205ENST00000423214 POLLQ9UGP5 575 aa20.81■□□□□ 0.92
COL18A1-205ENST00000423214 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 PDE8AO60658 829 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 UFL1O94874 794 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 RPS12P25398 132 aaKnown RBP20.8■□□□□ 0.92
COL18A1-205ENST00000423214 HIRAP54198 1017 aaPredicted RBP20.8■□□□□ 0.92
COL18A1-205ENST00000423214 DOK7Q18PE1 504 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 CDC37L1Q7L3B6 337 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 TBC1D16Q8TBP0 767 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 DPF2Q92785 391 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 SEC31BQ9NQW1 1179 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 ANKIB1Q9P2G1 1089 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
COL18A1-205ENST00000423214 SAPCD2Q86UD0 394 aa20.79■□□□□ 0.92
COL18A1-205ENST00000423214 METTL22Q9BUU2 404 aaPredicted RBP20.79■□□□□ 0.92
COL18A1-205ENST00000423214 ZC3H12CQ9C0D7 883 aaKnown RBP20.79■□□□□ 0.92
COL18A1-205ENST00000423214 AKAP11Q9UKA4 1901 aa20.78■□□□□ 0.92
COL18A1-205ENST00000423214 TBC1D10BQ4KMP7 808 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-205ENST00000423214 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
COL18A1-205ENST00000423214 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
COL18A1-205ENST00000423214 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
COL18A1-205ENST00000423214 GGA1Q9UJY5 639 aa20.78■□□□□ 0.92
COL18A1-205ENST00000423214 RTL9Q8NET4 1388 aa20.77■□□□□ 0.92
COL18A1-205ENST00000423214 ZNF646O15015 1829 aaPredicted RBP20.77■□□□□ 0.92
COL18A1-205ENST00000423214 SAMD7Q7Z3H4 446 aa20.77■□□□□ 0.92
COL18A1-205ENST00000423214 ANKRD18AQ8IVF6 992 aa20.77■□□□□ 0.92
COL18A1-205ENST00000423214 MAP3K2Q9Y2U5 619 aa20.77■□□□□ 0.92
COL18A1-205ENST00000423214 CASP8AP2Q9UKL3 1982 aa20.77■□□□□ 0.92
COL18A1-205ENST00000423214 AOC2O75106 756 aa20.76■□□□□ 0.91
COL18A1-205ENST00000423214 MAP2K2P36507 400 aa20.76■□□□□ 0.91
COL18A1-205ENST00000423214 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
COL18A1-205ENST00000423214 TSPYL6Q8N831 410 aa20.76■□□□□ 0.91
COL18A1-205ENST00000423214 JARID2Q92833 1246 aaPredicted RBP20.76■□□□□ 0.91
COL18A1-205ENST00000423214 TSR2Q969E8 191 aaKnown RBP20.76■□□□□ 0.91
COL18A1-205ENST00000423214 HHIPL1Q96JK4 782 aa20.76■□□□□ 0.91
COL18A1-205ENST00000423214 USP48Q86UV5 1035 aa20.75■□□□□ 0.91
COL18A1-205ENST00000423214 XDHP47989 1333 aa20.75■□□□□ 0.91
COL18A1-205ENST00000423214 CTSWP56202 376 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 KIF4BQ2VIQ3 1234 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 RBM26Q5T8P6 1007 aaKnown RBP20.74■□□□□ 0.91
COL18A1-205ENST00000423214 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 KRT26Q7Z3Y9 468 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 DCPSQ96C86 337 aaKnown RBP20.74■□□□□ 0.91
COL18A1-205ENST00000423214 CDC5LQ99459 802 aaKnown RBP20.74■□□□□ 0.91
COL18A1-205ENST00000423214 KCNQ5Q9NR82 932 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 A0A1B0GUL6 1792 aa20.74■□□□□ 0.91
COL18A1-205ENST00000423214 ZNF609O15014 1411 aa20.73■□□□□ 0.91
COL18A1-205ENST00000423214 PI4KAP2A4QPH2 592 aa20.73■□□□□ 0.91
COL18A1-205ENST00000423214 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
COL18A1-205ENST00000423214 EGFRP00533 1210 aa20.72■□□□□ 0.91
COL18A1-205ENST00000423214 CCDC27Q2M243 656 aa20.72■□□□□ 0.91
COL18A1-205ENST00000423214 TWISTNBQ3B726 338 aaPredicted RBP20.72■□□□□ 0.91
COL18A1-205ENST00000423214 CA12O43570 354 aa20.71■□□□□ 0.91
COL18A1-205ENST00000423214 VIL1P09327 827 aaKnown RBP20.71■□□□□ 0.91
COL18A1-205ENST00000423214 BRPF1P55201 1214 aaPredicted RBP20.71■□□□□ 0.91
COL18A1-205ENST00000423214 HUNKP57058 714 aa20.71■□□□□ 0.91
COL18A1-205ENST00000423214 GGA3Q9NZ52 723 aa20.71■□□□□ 0.91
COL18A1-205ENST00000423214 ADM5C9JUS6 153 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 IGKV5-2P06315 115 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 WWC1Q8IX03 1113 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 TSKSQ9UJT2 592 aa20.7■□□□□ 0.9
COL18A1-205ENST00000423214 PAPPA2Q9BXP8 1791 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 ZNF316A6NFI3 1004 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-205ENST00000423214 NOGQ13253 232 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 CWF19L2Q2TBE0 894 aaKnown RBP20.69■□□□□ 0.9
COL18A1-205ENST00000423214 RSBN1LQ6PCB5 846 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-205ENST00000423214 SULF1Q8IWU6 871 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 C2orf69Q8N8R5 385 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 GBA2Q9HCG7 927 aaPredicted RBP20.69■□□□□ 0.9
COL18A1-205ENST00000423214 IL16Q14005 1332 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 MED23Q9ULK4 1368 aa20.69■□□□□ 0.9
COL18A1-205ENST00000423214 NEURL1BA8MQ27 555 aa20.68■□□□□ 0.9
COL18A1-205ENST00000423214 UBE3BQ7Z3V4 1068 aa20.68■□□□□ 0.9
COL18A1-205ENST00000423214 AGBL3Q8NEM8 1001 aa20.68■□□□□ 0.9
COL18A1-205ENST00000423214 ECM29Q5VYK3 1845 aa20.68■□□□□ 0.9
COL18A1-205ENST00000423214 DLK2Q6UY11 383 aa20.67■□□□□ 0.9
COL18A1-205ENST00000423214 TTLL11Q8NHH1 800 aa20.67■□□□□ 0.9
COL18A1-205ENST00000423214 ABHD8Q96I13 439 aa20.67■□□□□ 0.9
COL18A1-205ENST00000423214 GREM2Q9H772 168 aa20.67■□□□□ 0.9
COL18A1-205ENST00000423214 MRS2Q9HD23 443 aa20.67■□□□□ 0.9
COL18A1-205ENST00000423214 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
COL18A1-205ENST00000423214 BSDC1Q9NW68 430 aaPredicted RBP20.66■□□□□ 0.9
COL18A1-205ENST00000423214 FANCIQ9NVI1 1328 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 USP17L3A6NCW0 530 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 USP17L4A6NCW7 530 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 IGHMBP2P38935 993 aaKnown RBP20.65■□□□□ 0.9
COL18A1-205ENST00000423214 FLIIQ13045 1269 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-205ENST00000423214 RGMBQ6NW40 437 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 G2E3Q7L622 706 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 USP17L1Q7RTZ2 530 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
COL18A1-205ENST00000423214 ASTN2O75129 1339 aaPredicted RBP20.64■□□□□ 0.89
COL18A1-205ENST00000423214 ZNF280AP59817 542 aaPredicted RBP20.64■□□□□ 0.89
COL18A1-205ENST00000423214 FBXW7Q969H0 707 aa20.64■□□□□ 0.89
COL18A1-205ENST00000423214 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms