RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 ABCC12Q96J65 1359 aa5.83□□□□□ -1.48
ITGB1-205ENST00000423113 SYCE3A1L190 88 aa5.83□□□□□ -1.48
ITGB1-205ENST00000423113 OS9Q13438 667 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-205ENST00000423113 SLC15A2Q16348 729 aa5.83□□□□□ -1.48
ITGB1-205ENST00000423113 SYAP1Q96A49 352 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-205ENST00000423113 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
ITGB1-205ENST00000423113 RBSNQ9H1K0 784 aa5.83□□□□□ -1.48
ITGB1-205ENST00000423113 CWC15Q9P013 229 aaKnown RBP5.83□□□□□ -1.48
ITGB1-205ENST00000423113 GOLIM4O00461 696 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 ALDH1L1O75891 902 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 HMGB1P09429 215 aaKnown RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 PTGER2P43116 358 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 CCDC30Q5VVM6 783 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 PPP4R3CPQ6ZMV5 832 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 TTC12Q9H892 705 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 OTOFQ9HC10 1997 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 TEFQ10587 303 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 TWISTNBQ3B726 338 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 TSPYL6Q8N831 410 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 CLUAP1Q96AJ1 413 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 RWDD1Q9H446 243 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 RBM27Q9P2N5 1060 aaKnown RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 CALRP27797 417 aaKnown RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 NOL10Q9BSC4 688 aaKnown RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
ITGB1-205ENST00000423113 CIZ1Q9ULV3 898 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-205ENST00000423113 POLR3GO15318 223 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-205ENST00000423113 DCTN1Q14203 1278 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 KLHL40Q2TBA0 621 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 BEND3Q5T5X7 828 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 GIGYF2Q6Y7W6 1299 aaKnown RBP5.81□□□□□ -1.48
ITGB1-205ENST00000423113 SPC24Q8NBT2 197 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 CCDC112Q8NEF3 446 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 PLCD4Q9BRC7 762 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 COL4A5P29400 1685 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 RIOK3O14730 519 aaKnown RBP5.81□□□□□ -1.48
ITGB1-205ENST00000423113 NTSR2O95665 410 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 STARD3NLO95772 234 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 APBA3O96018 575 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 HOXA10P31260 410 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-205ENST00000423113 ZSCAN23Q3MJ62 389 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 CTR9Q6PD62 1173 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 TICAM2Q86XR7 235 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 EFCC1Q9HA90 598 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 UBN2Q6ZU65 1347 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 H7C1W4 665 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 TRIM37O94972 964 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 METTL22Q9BUU2 404 aaPredicted RBP5.81□□□□□ -1.48
ITGB1-205ENST00000423113 TSPY26PQ9H489 355 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 SMC4Q9NTJ3 1288 aa5.81□□□□□ -1.48
ITGB1-205ENST00000423113 A0A0G2JMZ2 1700 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 LTBP3Q9NS15 1303 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 POLRMTO00411 1230 aaKnown RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 CSF1RP07333 972 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 CHRM1P11229 460 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 GYS1P13807 737 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 EXOSC9Q06265 439 aaKnown RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 NEUROD2Q15784 382 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 TMED8Q6PL24 325 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 USP16Q9Y5T5 823 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 MYH8P13535 1937 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 KSR2Q6VAB6 950 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 C15orf52Q6ZUT6 534 aaKnown RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 PANK1Q8TE04 598 aa5.8□□□□□ -1.48
ITGB1-205ENST00000423113 THUMPD2Q9BTF0 503 aaKnown RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 CCNL1Q9UK58 526 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 ZBTB12Q9Y330 459 aaPredicted RBP5.8□□□□□ -1.48
ITGB1-205ENST00000423113 IGHDP01880 384 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PARP10Q53GL7 1025 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 HSP90AB3PQ58FF7 597 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 DNAJC10Q8IXB1 793 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 ZNF710Q8N1W2 664 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 CCDC191Q8NCU4 936 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 SSH1Q8WYL5 1049 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 USP25Q9UHP3 1055 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PDS5AQ29RF7 1337 aaKnown RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 RBBP6Q7Z6E9 1792 aaKnown RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 BAG4O95429 457 aaKnown RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 IGKV5-2P06315 115 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PRR29P0C7W0 189 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 NUCB2P80303 420 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PRAMEF22A3QJZ6 481 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PHF14O94880 888 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 POLA2Q14181 598 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 EZH2Q15910 746 aaKnown RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 PROSER3Q2NL68 480 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 TTLL5Q6EMB2 1281 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 DDX54Q8TDD1 881 aaKnown RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 ZBTB1Q9Y2K1 713 aa5.79□□□□□ -1.48
ITGB1-205ENST00000423113 V9GYY5 206 aaPredicted RBP5.79□□□□□ -1.48
ITGB1-205ENST00000423113 HNRNPH2P55795 449 aaKnown RBP5.78□□□□□ -1.48
ITGB1-205ENST00000423113 TCIRG1Q13488 830 aa5.78□□□□□ -1.48
ITGB1-205ENST00000423113 SF3B3Q15393 1217 aaKnown RBP5.78□□□□□ -1.48
ITGB1-205ENST00000423113 TPD52L1Q16890 204 aaPredicted RBP5.78□□□□□ -1.48
ITGB1-205ENST00000423113 VPS33BQ9H267 617 aa5.78□□□□□ -1.48
ITGB1-205ENST00000423113 GEMIN8Q9NWZ8 242 aaKnown RBP5.78□□□□□ -1.48
ITGB1-205ENST00000423113 STK32BQ9NY57 414 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms