RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 GJA3Q9Y6H8 435 aa33.35■■■□□ 2.93
CDK9-202ENST00000421939 KIF16BQ96L93 1317 aa33.34■■■□□ 2.93
CDK9-202ENST00000421939 CHMP3Q9Y3E7 222 aa33.34■■■□□ 2.93
CDK9-202ENST00000421939 ANKRD18BA2A2Z9 1011 aa33.33■■■□□ 2.93
CDK9-202ENST00000421939 NBPF7P0C2Y1 421 aaPredicted RBP33.33■■■□□ 2.93
CDK9-202ENST00000421939 LMBR1LQ6UX01 489 aa33.33■■■□□ 2.93
CDK9-202ENST00000421939 API5Q9BZZ5 524 aaKnown RBP33.33■■■□□ 2.93
CDK9-202ENST00000421939 SUCLG2Q96I99 432 aa33.32■■■□□ 2.92
CDK9-202ENST00000421939 GPR101Q96P66 508 aaPredicted RBP33.32■■■□□ 2.92
CDK9-202ENST00000421939 RIMBP2O15034 1052 aa33.31■■■□□ 2.92
CDK9-202ENST00000421939 FSTL1Q12841 308 aa33.31■■■□□ 2.92
CDK9-202ENST00000421939 IFIT5Q13325 482 aaKnown RBP33.31■■■□□ 2.92
CDK9-202ENST00000421939 MPHOSPH8Q99549 860 aa33.31■■■□□ 2.92
CDK9-202ENST00000421939 MINPP1Q9UNW1 487 aa33.31■■■□□ 2.92
CDK9-202ENST00000421939 CXCL9Q07325 125 aa33.3■■■□□ 2.92
CDK9-202ENST00000421939 SMC1BQ8NDV3 1235 aa33.3■■■□□ 2.92
CDK9-202ENST00000421939 TAF1DQ9H5J8 278 aaPredicted RBP33.3■■■□□ 2.92
CDK9-202ENST00000421939 HACL1Q9UJ83 578 aa33.3■■■□□ 2.92
CDK9-202ENST00000421939 ATP2B4P23634 1241 aa33.28■■■□□ 2.92
CDK9-202ENST00000421939 CCT4P50991 539 aaKnown RBP33.28■■■□□ 2.92
CDK9-202ENST00000421939 KAZALD1Q96I82 304 aa33.28■■■□□ 2.92
CDK9-202ENST00000421939 ZC3H12CQ9C0D7 883 aaKnown RBP33.28■■■□□ 2.92
CDK9-202ENST00000421939 DBNDD1Q9H9R9 158 aa33.28■■■□□ 2.92
CDK9-202ENST00000421939 YDJCA8MPS7 323 aa33.27■■■□□ 2.92
CDK9-202ENST00000421939 HSPA6P17066 643 aa33.27■■■□□ 2.92
CDK9-202ENST00000421939 CIAPIN1Q6FI81 312 aa33.27■■■□□ 2.92
CDK9-202ENST00000421939 RAD17O75943 681 aa33.26■■■□□ 2.91
CDK9-202ENST00000421939 CCDC57Q2TAC2 916 aa33.26■■■□□ 2.91
CDK9-202ENST00000421939 ARHGAP45Q92619 1136 aa33.26■■■□□ 2.91
CDK9-202ENST00000421939 USP44Q9H0E7 712 aa33.26■■■□□ 2.91
CDK9-202ENST00000421939 ECE2O60344 883 aa33.25■■■□□ 2.91
CDK9-202ENST00000421939 LMOD1P29536 600 aaPredicted RBP33.25■■■□□ 2.91
CDK9-202ENST00000421939 EPHX2P34913 555 aa33.25■■■□□ 2.91
CDK9-202ENST00000421939 SCNN1DP51172 638 aa33.25■■■□□ 2.91
CDK9-202ENST00000421939 TNIP1Q15025 636 aa33.24■■■□□ 2.91
CDK9-202ENST00000421939 DOK7Q18PE1 504 aa33.24■■■□□ 2.91
CDK9-202ENST00000421939 ANKRD2Q9GZV1 360 aa33.24■■■□□ 2.91
CDK9-202ENST00000421939 BICC1Q9H694 974 aaKnown RBP33.24■■■□□ 2.91
CDK9-202ENST00000421939 TAF7LQ5H9L4 462 aa33.23■■■□□ 2.91
CDK9-202ENST00000421939 MED23Q9ULK4 1368 aa33.22■■■□□ 2.91
CDK9-202ENST00000421939 BCAR3O75815 825 aa33.22■■■□□ 2.91
CDK9-202ENST00000421939 POTEIP0CG38 1075 aa33.22■■■□□ 2.91
CDK9-202ENST00000421939 POTEJP0CG39 1038 aa33.22■■■□□ 2.91
CDK9-202ENST00000421939 RABL6Q3YEC7 729 aaPredicted RBP33.22■■■□□ 2.91
CDK9-202ENST00000421939 CEP350Q5VT06 3117 aa33.22■■■□□ 2.91
CDK9-202ENST00000421939 CHRNDQ07001 517 aa33.21■■■□□ 2.91
CDK9-202ENST00000421939 LDHDQ86WU2 507 aa33.21■■■□□ 2.91
CDK9-202ENST00000421939 LEMD3Q9Y2U8 911 aa33.21■■■□□ 2.91
CDK9-202ENST00000421939 A0A1B0GUL6 1792 aa33.2■■■□□ 2.91
CDK9-202ENST00000421939 G3V3G9 751 aa33.2■■■□□ 2.91
CDK9-202ENST00000421939 IPO8O15397 1037 aaKnown RBP33.2■■■□□ 2.91
CDK9-202ENST00000421939 GMPSP49915 693 aaPredicted RBP33.2■■■□□ 2.91
CDK9-202ENST00000421939 EAPPQ56P03 285 aaPredicted RBP33.2■■■□□ 2.91
CDK9-202ENST00000421939 DCAF8Q5TAQ9 597 aa33.2■■■□□ 2.91
CDK9-202ENST00000421939 ANKRD44Q8N8A2 993 aa33.2■■■□□ 2.91
CDK9-202ENST00000421939 ZNF594Q96JF6 807 aaPredicted RBP33.2■■■□□ 2.91
CDK9-202ENST00000421939 ADAMTSL1Q8N6G6 1762 aa33.19■■■□□ 2.9
CDK9-202ENST00000421939 WTIPA6NIX2 430 aaPredicted RBP33.19■■■□□ 2.9
CDK9-202ENST00000421939 CHADLQ6NUI6 762 aa33.19■■■□□ 2.9
CDK9-202ENST00000421939 PNMA8AQ86V59 439 aaPredicted RBP33.19■■■□□ 2.9
CDK9-202ENST00000421939 FRAT1Q92837 279 aaPredicted RBP33.18■■■□□ 2.9
CDK9-202ENST00000421939 GPRC5DQ9NZD1 345 aa33.18■■■□□ 2.9
CDK9-202ENST00000421939 PSMD14O00487 310 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 TRIM27P14373 513 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 EPS15P42566 896 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 ATF7IPQ6VMQ6 1270 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 LDHAL6AQ6ZMR3 332 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 SCN9AQ15858 1988 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 ZNF804BA4D1E1 1349 aa33.17■■■□□ 2.9
CDK9-202ENST00000421939 UBTFL1P0CB47 393 aaPredicted RBP33.16■■■□□ 2.9
CDK9-202ENST00000421939 CNNM1Q9NRU3 951 aa33.16■■■□□ 2.9
CDK9-202ENST00000421939 KCNJ4P48050 445 aa33.15■■■□□ 2.9
CDK9-202ENST00000421939 INTS3Q68E01 1043 aaKnown RBP33.15■■■□□ 2.9
CDK9-202ENST00000421939 KCNQ5Q9NR82 932 aa33.15■■■□□ 2.9
CDK9-202ENST00000421939 APLP1P51693 650 aa33.14■■■□□ 2.9
CDK9-202ENST00000421939 HELBQ8NG08 1087 aaPredicted RBP33.13■■■□□ 2.89
CDK9-202ENST00000421939 ADARB2Q9NS39 739 aaKnown RBP33.13■■■□□ 2.89
CDK9-202ENST00000421939 TAF5LO75529 589 aa33.12■■■□□ 2.89
CDK9-202ENST00000421939 CLEC11AQ9Y240 323 aa33.12■■■□□ 2.89
CDK9-202ENST00000421939 ZBTB12Q9Y330 459 aaPredicted RBP33.12■■■□□ 2.89
CDK9-202ENST00000421939 PSME4Q14997 1843 aa33.12■■■□□ 2.89
CDK9-202ENST00000421939 KLRK1P26718 216 aa33.11■■■□□ 2.89
CDK9-202ENST00000421939 USP50Q70EL3 339 aaPredicted RBP33.11■■■□□ 2.89
CDK9-202ENST00000421939 PODNQ7Z5L7 613 aa33.11■■■□□ 2.89
CDK9-202ENST00000421939 TXNRD3Q86VQ6 643 aa33.11■■■□□ 2.89
CDK9-202ENST00000421939 TNNQ9UQP3 1299 aa33.11■■■□□ 2.89
CDK9-202ENST00000421939 RPS12P25398 132 aaKnown RBP33.1■■■□□ 2.89
CDK9-202ENST00000421939 ZKSCAN2Q63HK3 967 aa33.1■■■□□ 2.89
CDK9-202ENST00000421939 DPF2Q92785 391 aa33.1■■■□□ 2.89
CDK9-202ENST00000421939 MEIS3Q99687 375 aa33.1■■■□□ 2.89
CDK9-202ENST00000421939 HDAC5Q9UQL6 1122 aa33.1■■■□□ 2.89
CDK9-202ENST00000421939 VIL1P09327 827 aaKnown RBP33.09■■■□□ 2.89
CDK9-202ENST00000421939 COA1Q9GZY4 146 aa33.09■■■□□ 2.89
CDK9-202ENST00000421939 SNAP23O00161 211 aa33.08■■■□□ 2.89
CDK9-202ENST00000421939 CLUAP1Q96AJ1 413 aa33.08■■■□□ 2.89
CDK9-202ENST00000421939 PUS3Q9BZE2 481 aaKnown RBP33.08■■■□□ 2.89
CDK9-202ENST00000421939 CNOT7Q9UIV1 285 aaKnown RBP33.08■■■□□ 2.89
CDK9-202ENST00000421939 ZNF609O15014 1411 aa33.08■■■□□ 2.89
CDK9-202ENST00000421939 MICALL2Q8IY33 904 aa33.07■■■□□ 2.88
CDK9-202ENST00000421939 LRRFIP2Q9Y608 721 aaKnown RBP33.07■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms