RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 BCL9O00512 1426 aa19.26■□□□□ 0.67
CTSB-203ENST00000420692 KRT32Q14532 448 aa19.26■□□□□ 0.67
CTSB-203ENST00000420692 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
CTSB-203ENST00000420692 VPS37CA5D8V6 355 aaPredicted RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 FIBPO43427 364 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 LARP1BQ659C4 914 aaKnown RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 CDC37L1Q7L3B6 337 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 ZBTB38Q8NAP3 1195 aaPredicted RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 STARD3NLO95772 234 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 STK3Q13188 491 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
CTSB-203ENST00000420692 CEP126Q9P2H0 1117 aa19.25■□□□□ 0.67
CTSB-203ENST00000420692 UBE2HP62256 183 aa19.24■□□□□ 0.67
CTSB-203ENST00000420692 KIF6Q6ZMV9 814 aa19.24■□□□□ 0.67
CTSB-203ENST00000420692 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
CTSB-203ENST00000420692 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
CTSB-203ENST00000420692 Q6ZUG5 572 aa19.24■□□□□ 0.67
CTSB-203ENST00000420692 COL14A1Q05707 1796 aaKnown RBP19.23■□□□□ 0.67
CTSB-203ENST00000420692 MAST3O60307 1309 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 GPTP24298 496 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 SCARF1Q14162 830 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 FAM173BQ6P4H8 233 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 NLRP10Q86W26 655 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 RNF214Q8ND24 703 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.23■□□□□ 0.67
CTSB-203ENST00000420692 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 LRRC2Q9BYS8 371 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 LRP6O75581 1613 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
CTSB-203ENST00000420692 M0R2C6 588 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
CTSB-203ENST00000420692 JAK2O60674 1132 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 TPRNQ4KMQ1 711 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 SYAP1Q96A49 352 aaPredicted RBP19.23■□□□□ 0.67
CTSB-203ENST00000420692 DSCC1Q9BVC3 393 aa19.23■□□□□ 0.67
CTSB-203ENST00000420692 HSPD1P10809 573 aaKnown RBP19.22■□□□□ 0.67
CTSB-203ENST00000420692 FERMT3Q86UX7 667 aa19.22■□□□□ 0.67
CTSB-203ENST00000420692 TICAM2Q86XR7 235 aa19.22■□□□□ 0.67
CTSB-203ENST00000420692 TSPY26PQ9H489 355 aa19.22■□□□□ 0.67
CTSB-203ENST00000420692 FBXO3Q9UK99 471 aa19.22■□□□□ 0.67
CTSB-203ENST00000420692 ZBTB1Q9Y2K1 713 aa19.22■□□□□ 0.67
CTSB-203ENST00000420692 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 RIC1Q4ADV7 1423 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 FOXP2O15409 715 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 TTLL11Q8NHH1 800 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 ANP32BQ92688 251 aaKnown RBP19.21■□□□□ 0.67
CTSB-203ENST00000420692 RIPOR2Q9Y4F9 1068 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 CDHR2Q9BYE9 1310 aa19.21■□□□□ 0.67
CTSB-203ENST00000420692 EXOSC10Q01780 885 aaKnown RBP19.2■□□□□ 0.66
CTSB-203ENST00000420692 CCDC183Q5T5S1 534 aa19.2■□□□□ 0.66
CTSB-203ENST00000420692 NUP98P52948 1817 aa19.2■□□□□ 0.66
CTSB-203ENST00000420692 FKBP4Q02790 459 aaKnown RBP eCLIP19.2■□□□□ 0.66
CTSB-203ENST00000420692 IFIT5Q13325 482 aaKnown RBP19.2■□□□□ 0.66
CTSB-203ENST00000420692 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
CTSB-203ENST00000420692 GREM2Q9H772 168 aa19.2■□□□□ 0.66
CTSB-203ENST00000420692 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 TTLL5Q6EMB2 1281 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 BRF1Q92994 677 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 PLCH1Q4KWH8 1693 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 NWD2Q9ULI1 1742 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 AKAP11Q9UKA4 1901 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 PDCP20941 246 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 PI16Q6UXB8 463 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 DHX32Q7L7V1 743 aaKnown RBP19.19■□□□□ 0.66
CTSB-203ENST00000420692 AKAP2Q9Y2D5 859 aa19.19■□□□□ 0.66
CTSB-203ENST00000420692 E7EWF7 191 aa19.18■□□□□ 0.66
CTSB-203ENST00000420692 SCRN1Q12765 414 aa19.18■□□□□ 0.66
CTSB-203ENST00000420692 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
CTSB-203ENST00000420692 ROBO1Q9Y6N7 1651 aa19.18■□□□□ 0.66
CTSB-203ENST00000420692 MYH3P11055 1940 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 EXOC5O00471 708 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 ITGA6P23229 1130 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 CCDC158Q5M9N0 1113 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 TTC39AQ5SRH9 613 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 SLIT2O94813 1529 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 PHF14O94880 888 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 ZAP70P43403 619 aa19.17■□□□□ 0.66
CTSB-203ENST00000420692 WNK3Q9BYP7 1800 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 COL22A1Q8NFW1 1626 aaPredicted RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 PFKFB2O60825 505 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 CTDNEP1O95476 244 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 PDIA4P13667 645 aaKnown RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 CTSWP56202 376 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 VGLL2Q8N8G2 317 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 FUCA2Q9BTY2 467 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 GORABQ5T7V8 394 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 SMARCC2Q8TAQ2 1214 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 ANO8Q9HCE9 1232 aaPredicted RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.16■□□□□ 0.66
CTSB-203ENST00000420692 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
CTSB-203ENST00000420692 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms