RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 LRRC37AA6NMS7 1700 aa25.32■■□□□ 1.64
EGFR-204ENST00000420316 LMNB1P20700 586 aa25.31■■□□□ 1.64
EGFR-204ENST00000420316 GPSM2P81274 684 aa25.31■■□□□ 1.64
EGFR-204ENST00000420316 MPNDQ8N594 471 aa25.31■■□□□ 1.64
EGFR-204ENST00000420316 SIL1Q9H173 461 aa25.31■■□□□ 1.64
EGFR-204ENST00000420316 LRRC24Q50LG9 513 aa25.31■■□□□ 1.64
EGFR-204ENST00000420316 WTIPA6NIX2 430 aaPredicted RBP25.3■■□□□ 1.64
EGFR-204ENST00000420316 PTPN12Q05209 780 aaKnown RBP25.3■■□□□ 1.64
EGFR-204ENST00000420316 CEP85Q6P2H3 762 aa25.3■■□□□ 1.64
EGFR-204ENST00000420316 DPP8Q6V1X1 898 aaPredicted RBP25.3■■□□□ 1.64
EGFR-204ENST00000420316 LDHAL6AQ6ZMR3 332 aa25.3■■□□□ 1.64
EGFR-204ENST00000420316 HELBQ8NG08 1087 aaPredicted RBP25.3■■□□□ 1.64
EGFR-204ENST00000420316 RTFDC1Q9BY42 306 aaPredicted RBP25.3■■□□□ 1.64
EGFR-204ENST00000420316 ATP8B2P98198 1209 aa25.29■■□□□ 1.64
EGFR-204ENST00000420316 GPR101Q96P66 508 aaPredicted RBP25.29■■□□□ 1.64
EGFR-204ENST00000420316 CNNM1Q9NRU3 951 aa25.29■■□□□ 1.64
EGFR-204ENST00000420316 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
EGFR-204ENST00000420316 NSFL1CQ9UNZ2 370 aaKnown RBP25.29■■□□□ 1.64
EGFR-204ENST00000420316 CCDC88AQ3V6T2 1871 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 PRELPP51888 382 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 MTX1Q13505 466 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 C9orf131Q5VYM1 1079 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 SUPT20HQ8NEM7 779 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 PODXL2Q9NZ53 605 aa25.28■■□□□ 1.64
EGFR-204ENST00000420316 A0A1B0GUL6 1792 aa25.27■■□□□ 1.64
EGFR-204ENST00000420316 VPS33BQ9H267 617 aa25.27■■□□□ 1.64
EGFR-204ENST00000420316 RNF181Q9P0P0 153 aa25.27■■□□□ 1.64
EGFR-204ENST00000420316 CHD4Q14839 1912 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 SNAP23O00161 211 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 TAF5LO75529 589 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 CHRNDQ07001 517 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 SIRT2Q8IXJ6 389 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 CHMP4BQ9H444 224 aaKnown RBP25.26■■□□□ 1.63
EGFR-204ENST00000420316 ZNF277Q9NRM2 450 aaPredicted RBP25.26■■□□□ 1.63
EGFR-204ENST00000420316 ANKIB1Q9P2G1 1089 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 DUOX1Q9NRD9 1551 aa25.26■■□□□ 1.63
EGFR-204ENST00000420316 SBF1O95248 1867 aa25.24■■□□□ 1.63
EGFR-204ENST00000420316 LTBP1Q14766 1721 aa25.24■■□□□ 1.63
EGFR-204ENST00000420316 IARSP41252 1262 aaKnown RBP25.24■■□□□ 1.63
EGFR-204ENST00000420316 POLA2Q14181 598 aa25.24■■□□□ 1.63
EGFR-204ENST00000420316 POLLQ9UGP5 575 aa25.24■■□□□ 1.63
EGFR-204ENST00000420316 XDHP47989 1333 aa25.24■■□□□ 1.63
EGFR-204ENST00000420316 SSH3Q8TE77 659 aa25.23■■□□□ 1.63
EGFR-204ENST00000420316 ANKRD2Q9GZV1 360 aa25.23■■□□□ 1.63
EGFR-204ENST00000420316 RIPOR2Q9Y4F9 1068 aa25.23■■□□□ 1.63
EGFR-204ENST00000420316 C6orf229H3BNL8 230 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 ATG9AQ7Z3C6 839 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 TBC1D16Q8TBP0 767 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 PCDHB15Q9Y5E8 787 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 EYA2O00167 538 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 UFL1O94874 794 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 YY1P25490 414 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 COPRSQ9NQ92 184 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 GGA1Q9UJY5 639 aa25.22■■□□□ 1.63
EGFR-204ENST00000420316 ZC3H4Q9UPT8 1303 aaKnown RBP25.22■■□□□ 1.63
EGFR-204ENST00000420316 RIMBP2O15034 1052 aa25.21■■□□□ 1.63
EGFR-204ENST00000420316 ATP2B4P23634 1241 aa25.21■■□□□ 1.63
EGFR-204ENST00000420316 METTL24Q5JXM2 366 aa25.2■■□□□ 1.62
EGFR-204ENST00000420316 EYA3Q99504 573 aa25.2■■□□□ 1.62
EGFR-204ENST00000420316 KIAA2012Q0VF49 1180 aa25.19■■□□□ 1.62
EGFR-204ENST00000420316 AOC3Q16853 763 aa25.19■■□□□ 1.62
EGFR-204ENST00000420316 RPAP2Q8IXW5 612 aaPredicted RBP25.19■■□□□ 1.62
EGFR-204ENST00000420316 FBXO3Q9UK99 471 aa25.19■■□□□ 1.62
EGFR-204ENST00000420316 LEMD3Q9Y2U8 911 aa25.19■■□□□ 1.62
EGFR-204ENST00000420316 PPIP5K2O43314 1243 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 SURF6O75683 361 aaKnown RBP25.18■■□□□ 1.62
EGFR-204ENST00000420316 KLRK1P26718 216 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 COL4A5P29400 1685 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 WASHC4Q2M389 1173 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 LARGE2Q8N3Y3 721 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.18■■□□□ 1.62
EGFR-204ENST00000420316 JDP2Q8WYK2 163 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 EXOC6BQ9Y2D4 811 aa25.18■■□□□ 1.62
EGFR-204ENST00000420316 MROH5Q6ZUA9 1318 aa25.17■■□□□ 1.62
EGFR-204ENST00000420316 ZC3H12CQ9C0D7 883 aaKnown RBP25.17■■□□□ 1.62
EGFR-204ENST00000420316 KCNJ4P48050 445 aa25.16■■□□□ 1.62
EGFR-204ENST00000420316 ZNF804BA4D1E1 1349 aa25.15■■□□□ 1.62
EGFR-204ENST00000420316 APBB1O00213 710 aa25.15■■□□□ 1.62
EGFR-204ENST00000420316 CIAO1O76071 339 aa25.15■■□□□ 1.62
EGFR-204ENST00000420316 G3BP1Q13283 466 aaKnown RBP eCLIP25.15■■□□□ 1.62
EGFR-204ENST00000420316 OS9Q13438 667 aaPredicted RBP25.15■■□□□ 1.62
EGFR-204ENST00000420316 TXNRD3Q86VQ6 643 aa25.15■■□□□ 1.62
EGFR-204ENST00000420316 VGLL2Q8N8G2 317 aa25.15■■□□□ 1.62
EGFR-204ENST00000420316 FZD9O00144 591 aa25.14■■□□□ 1.62
EGFR-204ENST00000420316 TFCP2Q12800 502 aa25.14■■□□□ 1.62
EGFR-204ENST00000420316 BCL11AQ9H165 835 aa25.14■■□□□ 1.62
EGFR-204ENST00000420316 IL15P40933 162 aaPredicted RBP25.14■■□□□ 1.61
EGFR-204ENST00000420316 DOK7Q18PE1 504 aa25.14■■□□□ 1.61
EGFR-204ENST00000420316 NIM1KQ8IY84 436 aa25.14■■□□□ 1.61
EGFR-204ENST00000420316 DICER1Q9UPY3 1922 aaKnown RBP25.13■■□□□ 1.61
EGFR-204ENST00000420316 HMMRO75330 724 aa25.13■■□□□ 1.61
EGFR-204ENST00000420316 SASH1O94885 1247 aa25.13■■□□□ 1.61
EGFR-204ENST00000420316 PDE8BO95263 885 aa25.13■■□□□ 1.61
EGFR-204ENST00000420316 TIAM2Q8IVF5 1701 aa25.12■■□□□ 1.61
EGFR-204ENST00000420316 DBNDD1Q9H9R9 158 aa25.12■■□□□ 1.61
EGFR-204ENST00000420316 CEP126Q9P2H0 1117 aa25.12■■□□□ 1.61
EGFR-204ENST00000420316 UBE4AQ14139 1066 aa25.11■■□□□ 1.61
EGFR-204ENST00000420316 DPY19L2Q6NUT2 758 aa25.11■■□□□ 1.61
EGFR-204ENST00000420316 ZNRF3Q9ULT6 936 aa25.11■■□□□ 1.61
EGFR-204ENST00000420316 NOP58Q9Y2X3 529 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms