RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 HSP90B1P14625 803 aaKnown RBP13.37□□□□□ -0.27
RFC1-203ENST00000418436 YY1P25490 414 aa13.37□□□□□ -0.27
RFC1-203ENST00000418436 RARSP54136 660 aaKnown RBP13.37□□□□□ -0.27
RFC1-203ENST00000418436 GCKRQ14397 625 aa13.37□□□□□ -0.27
RFC1-203ENST00000418436 RTL5Q5HYW3 569 aaPredicted RBP13.37□□□□□ -0.27
RFC1-203ENST00000418436 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
RFC1-203ENST00000418436 MFRPQ9BY79 579 aa13.37□□□□□ -0.27
RFC1-203ENST00000418436 CASP7P55210 303 aa13.36□□□□□ -0.27
RFC1-203ENST00000418436 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
RFC1-203ENST00000418436 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
RFC1-203ENST00000418436 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
RFC1-203ENST00000418436 SMC4Q9NTJ3 1288 aa13.36□□□□□ -0.27
RFC1-203ENST00000418436 SNED1Q8TER0 1413 aa13.36□□□□□ -0.27
RFC1-203ENST00000418436 DICER1Q9UPY3 1922 aaKnown RBP13.35□□□□□ -0.27
RFC1-203ENST00000418436 NFKBIEO00221 500 aa13.35□□□□□ -0.27
RFC1-203ENST00000418436 PDE8AO60658 829 aa13.35□□□□□ -0.27
RFC1-203ENST00000418436 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
RFC1-203ENST00000418436 ABCC4O15439 1325 aa13.35□□□□□ -0.27
RFC1-203ENST00000418436 LTBP3Q9NS15 1303 aa13.35□□□□□ -0.27
RFC1-203ENST00000418436 ALDH1L1O75891 902 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 BBOX1O75936 387 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 PRELPP51888 382 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
RFC1-203ENST00000418436 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 PLA2G12BQ9BX93 195 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 COL4A1P02462 1669 aa13.34□□□□□ -0.27
RFC1-203ENST00000418436 LRRC37AA6NMS7 1700 aa13.33□□□□□ -0.27
RFC1-203ENST00000418436 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
RFC1-203ENST00000418436 RASSF7Q02833 373 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 GRAPQ13588 217 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 CCDC93Q567U6 631 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 CC2D2BQ6DHV5 1058 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 SLC4A10Q6U841 1118 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 UBE3BQ7Z3V4 1068 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 GRAPLQ8TC17 118 aaPredicted RBP13.33□□□□□ -0.28
RFC1-203ENST00000418436 SRCIN1Q9C0H9 1055 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 NOB1Q9ULX3 412 aaKnown RBP13.33□□□□□ -0.28
RFC1-203ENST00000418436 ATP6V0A2Q9Y487 856 aa13.33□□□□□ -0.28
RFC1-203ENST00000418436 LMNB1P20700 586 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 GRIPAP1Q4V328 841 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 C9orf131Q5VYM1 1079 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 ARHGAP45Q92619 1136 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
RFC1-203ENST00000418436 POTEMA6NI47 508 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 GRM8O00222 908 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 SNPHO15079 494 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 CTSWP56202 376 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 CCDC152Q4G0S7 254 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 TMC4Q7Z404 712 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 SP8Q8IXZ3 490 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 TTLL11Q8NHH1 800 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 CELF1Q92879 486 aaKnown RBP13.31□□□□□ -0.28
RFC1-203ENST00000418436 TAOK3Q9H2K8 898 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 UTYO14607 1347 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 KIF16BQ96L93 1317 aa13.31□□□□□ -0.28
RFC1-203ENST00000418436 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 BCAR3O75815 825 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 CSF1RP07333 972 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
RFC1-203ENST00000418436 SLC51AQ86UW1 340 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 PSMD1Q99460 953 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 API5Q9BZZ5 524 aaKnown RBP13.3□□□□□ -0.28
RFC1-203ENST00000418436 SEC31BQ9NQW1 1179 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 RNF181Q9P0P0 153 aa13.3□□□□□ -0.28
RFC1-203ENST00000418436 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
RFC1-203ENST00000418436 FOXO4P98177 505 aa13.29□□□□□ -0.28
RFC1-203ENST00000418436 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
RFC1-203ENST00000418436 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
RFC1-203ENST00000418436 C9orf78Q9NZ63 289 aaPredicted RBP13.29□□□□□ -0.28
RFC1-203ENST00000418436 ZC3H4Q9UPT8 1303 aaKnown RBP13.29□□□□□ -0.28
RFC1-203ENST00000418436 LTBP1Q14766 1721 aa13.28□□□□□ -0.28
RFC1-203ENST00000418436 SPEF2Q9C093 1822 aa13.28□□□□□ -0.28
RFC1-203ENST00000418436 IPO8O15397 1037 aaKnown RBP13.28□□□□□ -0.28
RFC1-203ENST00000418436 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
RFC1-203ENST00000418436 CCT4P50991 539 aaKnown RBP13.28□□□□□ -0.28
RFC1-203ENST00000418436 CCDC85AQ96PX6 553 aaPredicted RBP13.28□□□□□ -0.28
RFC1-203ENST00000418436 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
RFC1-203ENST00000418436 GREM2Q9H772 168 aa13.28□□□□□ -0.28
RFC1-203ENST00000418436 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
RFC1-203ENST00000418436 KAZALD1Q96I82 304 aa13.27□□□□□ -0.29
RFC1-203ENST00000418436 RTFDC1Q9BY42 306 aaPredicted RBP13.27□□□□□ -0.29
RFC1-203ENST00000418436 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
RFC1-203ENST00000418436 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.29
RFC1-203ENST00000418436 TRIM27P14373 513 aa13.26□□□□□ -0.29
RFC1-203ENST00000418436 INTS3Q68E01 1043 aaKnown RBP13.26□□□□□ -0.29
RFC1-203ENST00000418436 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
RFC1-203ENST00000418436 MPNDQ8N594 471 aa13.26□□□□□ -0.29
RFC1-203ENST00000418436 CDC5LQ99459 802 aaKnown RBP13.26□□□□□ -0.29
RFC1-203ENST00000418436 VPS33BQ9H267 617 aa13.26□□□□□ -0.29
RFC1-203ENST00000418436 ZNF277Q9NRM2 450 aaPredicted RBP13.26□□□□□ -0.29
RFC1-203ENST00000418436 ST18O60284 1047 aa13.25□□□□□ -0.29
RFC1-203ENST00000418436 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
RFC1-203ENST00000418436 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
RFC1-203ENST00000418436 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
RFC1-203ENST00000418436 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
RFC1-203ENST00000418436 COL4A5P29400 1685 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 ITGA6P23229 1130 aa13.24□□□□□ -0.29
RFC1-203ENST00000418436 RABL6Q3YEC7 729 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms