RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PANK1Q8TE04 598 aa28.89■■■□□ 2.22
SMARCB1-205ENST00000417137 EYA3Q99504 573 aa28.89■■■□□ 2.22
SMARCB1-205ENST00000417137 ANKRD2Q9GZV1 360 aa28.89■■■□□ 2.22
SMARCB1-205ENST00000417137 XDHP47989 1333 aa28.89■■■□□ 2.21
SMARCB1-205ENST00000417137 LARGE2Q8N3Y3 721 aa28.88■■■□□ 2.21
SMARCB1-205ENST00000417137 GGA1Q9UJY5 639 aa28.88■■■□□ 2.21
SMARCB1-205ENST00000417137 PPIP5K2O43314 1243 aa28.87■■■□□ 2.21
SMARCB1-205ENST00000417137 PDE3AQ14432 1141 aa28.87■■■□□ 2.21
SMARCB1-205ENST00000417137 GPBP1L1Q9HC44 474 aaPredicted RBP28.87■■■□□ 2.21
SMARCB1-205ENST00000417137 CNNM1Q9NRU3 951 aa28.87■■■□□ 2.21
SMARCB1-205ENST00000417137 ATP2B4P23634 1241 aa28.86■■■□□ 2.21
SMARCB1-205ENST00000417137 WASHC4Q2M389 1173 aa28.86■■■□□ 2.21
SMARCB1-205ENST00000417137 TBC1D16Q8TBP0 767 aa28.86■■■□□ 2.21
SMARCB1-205ENST00000417137 ZNF594Q96JF6 807 aaPredicted RBP28.86■■■□□ 2.21
SMARCB1-205ENST00000417137 COL4A1P02462 1669 aa28.86■■■□□ 2.21
SMARCB1-205ENST00000417137 ZBTB7BO15156 539 aaPredicted RBP28.85■■■□□ 2.21
SMARCB1-205ENST00000417137 DPY19L2Q6NUT2 758 aa28.85■■■□□ 2.21
SMARCB1-205ENST00000417137 CHMP4BQ9H444 224 aaKnown RBP28.85■■■□□ 2.21
SMARCB1-205ENST00000417137 POLLQ9UGP5 575 aa28.85■■■□□ 2.21
SMARCB1-205ENST00000417137 UFL1O94874 794 aa28.84■■■□□ 2.21
SMARCB1-205ENST00000417137 KIAA2012Q0VF49 1180 aa28.84■■■□□ 2.21
SMARCB1-205ENST00000417137 AOC3Q16853 763 aa28.84■■■□□ 2.21
SMARCB1-205ENST00000417137 SBF1O95248 1867 aa28.84■■■□□ 2.21
SMARCB1-205ENST00000417137 LRRC37AA6NMS7 1700 aa28.83■■■□□ 2.21
SMARCB1-205ENST00000417137 MVPQ14764 893 aaKnown RBP28.83■■■□□ 2.21
SMARCB1-205ENST00000417137 NIM1KQ8IY84 436 aa28.83■■■□□ 2.21
SMARCB1-205ENST00000417137 ZC3H12CQ9C0D7 883 aaKnown RBP28.83■■■□□ 2.21
SMARCB1-205ENST00000417137 LEMD3Q9Y2U8 911 aa28.83■■■□□ 2.21
SMARCB1-205ENST00000417137 CHRNDQ07001 517 aa28.82■■■□□ 2.2
SMARCB1-205ENST00000417137 DDX19BQ9UMR2 479 aa28.82■■■□□ 2.2
SMARCB1-205ENST00000417137 KDM2BQ8NHM5 1336 aa28.8■■■□□ 2.2
SMARCB1-205ENST00000417137 COG6Q9Y2V7 657 aa28.8■■■□□ 2.2
SMARCB1-205ENST00000417137 GLTPD2A6NH11 291 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 G3V3G9 751 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 FZD9O00144 591 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 RIMBP2O15034 1052 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 KCNJ4P48050 445 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 EIF6P56537 245 aaKnown RBP28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 MTX1Q13505 466 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 DCAF8Q5TAQ9 597 aa28.79■■■□□ 2.2
SMARCB1-205ENST00000417137 MROH5Q6ZUA9 1318 aa28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 SRGAP3O43295 1099 aa28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 RFX5P48382 616 aaPredicted RBP28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 ZNF526Q8TF50 670 aaPredicted RBP28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 FBXO3Q9UK99 471 aa28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 ZNRF3Q9ULT6 936 aa28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 RIPOR2Q9Y4F9 1068 aa28.78■■■□□ 2.2
SMARCB1-205ENST00000417137 ZNF804BA4D1E1 1349 aa28.77■■■□□ 2.2
SMARCB1-205ENST00000417137 PTPN12Q05209 780 aaKnown RBP28.77■■■□□ 2.2
SMARCB1-205ENST00000417137 PUS3Q9BZE2 481 aaKnown RBP28.77■■■□□ 2.2
SMARCB1-205ENST00000417137 RRP1P56182 461 aaKnown RBP28.76■■■□□ 2.19
SMARCB1-205ENST00000417137 HELBQ8NG08 1087 aaPredicted RBP28.76■■■□□ 2.19
SMARCB1-205ENST00000417137 KLHDC4Q8TBB5 520 aa28.76■■■□□ 2.19
SMARCB1-205ENST00000417137 CEP350Q5VT06 3117 aa28.76■■■□□ 2.19
SMARCB1-205ENST00000417137 CCDC88AQ3V6T2 1871 aa28.76■■■□□ 2.19
SMARCB1-205ENST00000417137 EYA2O00167 538 aa28.75■■■□□ 2.19
SMARCB1-205ENST00000417137 TAF5LO75529 589 aa28.75■■■□□ 2.19
SMARCB1-205ENST00000417137 C20orf194Q5TEA3 1177 aa28.75■■■□□ 2.19
SMARCB1-205ENST00000417137 DUOX1Q9NRD9 1551 aa28.75■■■□□ 2.19
SMARCB1-205ENST00000417137 LRRC24Q50LG9 513 aa28.74■■■□□ 2.19
SMARCB1-205ENST00000417137 METTL24Q5JXM2 366 aa28.74■■■□□ 2.19
SMARCB1-205ENST00000417137 GPR101Q96P66 508 aaPredicted RBP28.74■■■□□ 2.19
SMARCB1-205ENST00000417137 COPRSQ9NQ92 184 aa28.74■■■□□ 2.19
SMARCB1-205ENST00000417137 DICER1Q9UPY3 1922 aaKnown RBP28.73■■■□□ 2.19
SMARCB1-205ENST00000417137 ATP8B2P98198 1209 aa28.73■■■□□ 2.19
SMARCB1-205ENST00000417137 IFFO2Q5TF58 517 aa28.73■■■□□ 2.19
SMARCB1-205ENST00000417137 CIAO1O76071 339 aa28.72■■■□□ 2.19
SMARCB1-205ENST00000417137 HSPA6P17066 643 aa28.72■■■□□ 2.19
SMARCB1-205ENST00000417137 C1orf115Q9H7X2 142 aa28.72■■■□□ 2.19
SMARCB1-205ENST00000417137 MED23Q9ULK4 1368 aa28.72■■■□□ 2.19
SMARCB1-205ENST00000417137 UBE4AQ14139 1066 aa28.71■■■□□ 2.19
SMARCB1-205ENST00000417137 DOK7Q18PE1 504 aa28.71■■■□□ 2.19
SMARCB1-205ENST00000417137 DBNDD1Q9H9R9 158 aa28.71■■■□□ 2.19
SMARCB1-205ENST00000417137 LTBP1Q14766 1721 aa28.71■■■□□ 2.19
SMARCB1-205ENST00000417137 SPEF2Q9C093 1822 aa28.71■■■□□ 2.19
SMARCB1-205ENST00000417137 WTIPA6NIX2 430 aaPredicted RBP28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 ECE2O60344 883 aa28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 DDNO94850 711 aaPredicted RBP28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 TNIP1Q15025 636 aa28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 GPC2Q8N158 579 aa28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 SIL1Q9H173 461 aa28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 ZBTB40Q9NUA8 1239 aa28.7■■■□□ 2.18
SMARCB1-205ENST00000417137 ZNF541Q9H0D2 1346 aa28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 TIAM2Q8IVF5 1701 aa28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 PNMA6EA0A0J9YXQ4 647 aa28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 PDE8BO95263 885 aa28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 IL15P40933 162 aaPredicted RBP28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 C15orf52Q6ZUT6 534 aaKnown RBP28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 PA2G4Q9UQ80 394 aaKnown RBP28.69■■■□□ 2.18
SMARCB1-205ENST00000417137 CXCL9Q07325 125 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 CIAPIN1Q6FI81 312 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 PODNQ7Z5L7 613 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 COA1Q9GZY4 146 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 CEP126Q9P2H0 1117 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 GJA3Q9Y6H8 435 aa28.68■■■□□ 2.18
SMARCB1-205ENST00000417137 COL4A5P29400 1685 aa28.67■■■□□ 2.18
SMARCB1-205ENST00000417137 ATG9AQ7Z3C6 839 aa28.67■■■□□ 2.18
SMARCB1-205ENST00000417137 SSH3Q8TE77 659 aa28.67■■■□□ 2.18
SMARCB1-205ENST00000417137 RRAGCQ9HB90 399 aa28.67■■■□□ 2.18
SMARCB1-205ENST00000417137 VEGFAP15692 232 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms