RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ZNF330Q9Y3S2 320 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 MRVI1Q9Y6F6 885 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 TMEM2Q9UHN6 1383 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 TJP1Q07157 1748 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 TRPM3Q9HCF6 1732 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 POM121CA8CG34 1229 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 SMTNL1A8MU46 457 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 ELL2O00472 640 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 CAVIN2O95810 425 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 NCLP19338 710 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 AK2P54819 239 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 MTHFSDQ2M296 383 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 NYAP1Q6ZVC0 841 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 CREBRFQ8IUR6 639 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.75□□□□□ -1.819e-7■■■□□ 15.1
CUL3-204ENST00000409777 FAM200AQ8TCP9 573 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 RTF1Q92541 710 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 OGFRQ9NZT2 677 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 DDX41Q9UJV9 622 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 ATP6V1DQ9Y5K8 247 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 PLEKHG2Q9H7P9 1386 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 GRXCR2A6NFK2 248 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 LARGE1O95461 756 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 HCLS1P14317 486 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 KCNJ6P48051 423 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 EN1Q05925 392 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 KIF1AQ12756 1690 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 RRS1Q15050 365 aaKnown RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 SULT6B1Q6IMI4 303 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 MCM10Q7L590 875 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 TICAM2Q86XR7 235 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 RNF214Q8ND24 703 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 JARID2Q92833 1246 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 TTC12Q9H892 705 aaPredicted RBP3.75□□□□□ -1.81
CUL3-204ENST00000409777 POLR3EQ9NVU0 708 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 NWD2Q9ULI1 1742 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 ARFGEF2Q9Y6D5 1785 aa3.75□□□□□ -1.81
CUL3-204ENST00000409777 PAPPAQ13219 1627 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 CCDC30Q5VVM6 783 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 USPL1Q5W0Q7 1092 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 DHX37Q8IY37 1157 aaKnown RBP3.74□□□□□ -1.81
CUL3-204ENST00000409777 PDCL2Q8N4E4 241 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 CLSTN2Q9H4D0 955 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 NPDC1Q9NQX5 325 aaPredicted RBP3.74□□□□□ -1.81
CUL3-204ENST00000409777 PKD1L3Q7Z443 1732 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 ALS2Q96Q42 1657 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 SLFN14P0C7P3 912 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 ZNF75DP51815 510 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 SLC20A2Q08357 652 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 PPP4R3BQ5MIZ7 849 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 TTC6Q86TZ1 520 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 RHPN1Q8TCX5 695 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 MAP4K1Q92918 833 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 MRFAP1L1Q96HT8 127 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 GDPD2Q9HCC8 539 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 EXOC6BQ9Y2D4 811 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 PAXBP1Q9Y5B6 917 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 UBR2Q8IWV8 1755 aa3.74□□□□□ -1.81
CUL3-204ENST00000409777 AFDNP55196 1824 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 ACEP12821 1306 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 F6X3S4 739 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 CCDC192P0DO97 292 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 IQCB1Q15051 598 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 BEND3Q5T5X7 828 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 ZSCAN25Q6NSZ9 544 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 C17orf53Q8N3J3 647 aaPredicted RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 KIF1BPQ96EK5 621 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 ZNF830Q96NB3 372 aaPredicted RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 UBXN6Q9BZV1 441 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 ANO2Q9NQ90 1003 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 DDX19AQ9NUU7 478 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 LRRFIP2Q9Y608 721 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 ZNF142P52746 1687 aaPredicted RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 NEDD4P46934 1319 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 NPHP3Q7Z494 1330 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 NEMFO60524 1076 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 RFX1P22670 979 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 ADD1P35611 737 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 TYRO3Q06418 890 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 ME3Q16798 604 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 CCDC93Q567U6 631 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 HSP90AB2PQ58FF8 381 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 TSHZ3Q63HK5 1081 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 GPR153Q6NV75 609 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 KIF18AQ8NI77 898 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 NLRP7Q8WX94 980 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 TSC1Q92574 1164 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 UPF3BQ9BZI7 483 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 L2HGDHQ9H9P8 463 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 CGNQ9P2M7 1197 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 IVNS1ABPQ9Y6Y0 642 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 GOLGA6L6A8MZA4 724 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 GJB2P29033 226 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 DNM1Q05193 864 aaKnown RBP3.73□□□□□ -1.81
CUL3-204ENST00000409777 RESTQ13127 1097 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 HSP90AB4PQ58FF6 505 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 SH3D19Q5HYK7 790 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms