RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 NOLC1Q14978 699 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL6A2-204ENST00000409416 FILIP1Q7Z7B0 1213 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-204ENST00000409416 TNNI3KQ59H18 835 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
COL6A2-204ENST00000409416 NUP62CLQ9H1M0 184 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 TNMDQ9H2S6 317 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 INCENPQ9NQS7 918 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 SH2B1Q9NRF2 756 aaPredicted RBP15.78■□□□□ 0.12
COL6A2-204ENST00000409416 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 FPGT-TNNI3KV9GXZ4 949 aa15.78■□□□□ 0.12
COL6A2-204ENST00000409416 DIP2AQ14689 1571 aa15.77■□□□□ 0.12
COL6A2-204ENST00000409416 LIG1P18858 919 aa15.77■□□□□ 0.12
COL6A2-204ENST00000409416 LUZP1Q86V48 1076 aa15.77■□□□□ 0.12
COL6A2-204ENST00000409416 CWC25Q9NXE8 425 aaPredicted RBP15.77■□□□□ 0.12
COL6A2-204ENST00000409416 LETM1O95202 739 aaPredicted RBP15.77■□□□□ 0.11
COL6A2-204ENST00000409416 PDIA4P13667 645 aaKnown RBP15.77■□□□□ 0.11
COL6A2-204ENST00000409416 MCM5P33992 734 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 KIF6Q6ZMV9 814 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 NEK1Q96PY6 1258 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 SDF4Q9BRK5 362 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 TTC6Q86TZ1 520 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 NUP133Q8WUM0 1156 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 KAZALD1Q96I82 304 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 METTL22Q9BUU2 404 aaPredicted RBP15.77■□□□□ 0.11
COL6A2-204ENST00000409416 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.11
COL6A2-204ENST00000409416 BECN2A8MW95 431 aa15.76■□□□□ 0.11
COL6A2-204ENST00000409416 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
COL6A2-204ENST00000409416 A0A1B0GUL7 405 aa15.76■□□□□ 0.11
COL6A2-204ENST00000409416 MICU3Q86XE3 530 aa15.76■□□□□ 0.11
COL6A2-204ENST00000409416 CMTR1Q8N1G2 835 aaKnown RBP15.76■□□□□ 0.11
COL6A2-204ENST00000409416 ALDH1L1O75891 902 aa15.75■□□□□ 0.11
COL6A2-204ENST00000409416 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
COL6A2-204ENST00000409416 hCG_1642624A0A1W2PR95 340 aa15.75■□□□□ 0.11
COL6A2-204ENST00000409416 CCDC158Q5M9N0 1113 aa15.75■□□□□ 0.11
COL6A2-204ENST00000409416 MIGA1Q8NAN2 632 aa15.75■□□□□ 0.11
COL6A2-204ENST00000409416 ZNF335Q9H4Z2 1342 aaPredicted RBP15.75■□□□□ 0.11
COL6A2-204ENST00000409416 MINDY4BA8MYZ0 360 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 RAD21O60216 631 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 CHAF1AQ13111 956 aaPredicted RBP15.74■□□□□ 0.11
COL6A2-204ENST00000409416 IFIT5Q13325 482 aaKnown RBP15.74■□□□□ 0.11
COL6A2-204ENST00000409416 NECTIN1Q15223 517 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 CADPS2Q86UW7 1296 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 PAG1Q9NWQ8 432 aa15.74■□□□□ 0.11
COL6A2-204ENST00000409416 PXDNQ92626 1479 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 HIP1O00291 1037 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 MARCKSP29966 332 aaPredicted RBP15.73■□□□□ 0.11
COL6A2-204ENST00000409416 ST3GAL1Q11201 340 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 UVSSAQ2YD98 709 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 TMX1Q9H3N1 280 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 HOXB7P09629 217 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 PDCP20941 246 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 ANO6Q4KMQ2 910 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 VPS37DQ86XT2 251 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 DNAJC25Q9H1X3 360 aa15.73■□□□□ 0.11
COL6A2-204ENST00000409416 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 PTGS1P23219 599 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
COL6A2-204ENST00000409416 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 DCAF5Q96JK2 942 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 WWC3Q9ULE0 1092 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 PYCARDQ9ULZ3 195 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 RGPD1P0DJD0 1748 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 ZAP70P43403 619 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
COL6A2-204ENST00000409416 TYRO3Q06418 890 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
COL6A2-204ENST00000409416 AP5Z1O43299 807 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 SPECC1Q5M775 1068 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 MAP4K1Q92918 833 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 MPHOSPH8Q99549 860 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 TRDNQ13061 729 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 FAM177A1Q8N128 213 aaPredicted RBP15.71■□□□□ 0.11
COL6A2-204ENST00000409416 DENND2AQ9ULE3 1009 aa15.71■□□□□ 0.11
COL6A2-204ENST00000409416 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.1
COL6A2-204ENST00000409416 DYNC1I1O14576 645 aa15.71■□□□□ 0.1
COL6A2-204ENST00000409416 CYP21A2P08686 494 aa15.71■□□□□ 0.1
COL6A2-204ENST00000409416 RPS6KB1P23443 525 aa15.71■□□□□ 0.1
COL6A2-204ENST00000409416 TRMT1Q9NXH9 659 aaKnown RBP15.71■□□□□ 0.1
COL6A2-204ENST00000409416 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.1
COL6A2-204ENST00000409416 ANKRD1Q15327 319 aa15.7■□□□□ 0.1
COL6A2-204ENST00000409416 SLC9C2Q5TAH2 1124 aa15.7■□□□□ 0.1
COL6A2-204ENST00000409416 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
COL6A2-204ENST00000409416 IL2RBP14784 551 aa15.7■□□□□ 0.1
COL6A2-204ENST00000409416 HLFQ16534 295 aa15.7■□□□□ 0.1
COL6A2-204ENST00000409416 PDIA6Q15084 440 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 STK38Q15208 465 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 CCDC186Q7Z3E2 898 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 PDILTQ8N807 584 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 MCMDC2Q4G0Z9 681 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 C16orf45Q96MC5 204 aaPredicted RBP15.69■□□□□ 0.1
COL6A2-204ENST00000409416 KLF18A0A0U1RQI7 1052 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 LRMPQ12912 555 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 SCARF1Q14162 830 aa15.69■□□□□ 0.1
COL6A2-204ENST00000409416 CCDC73Q6ZRK6 1079 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms