RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 HDAC5Q9UQL6 1122 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 FPGT-TNNI3KV9GXZ4 949 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 ISM2Q6H9L7 571 aa19.83■□□□□ 0.76
SYNC-202ENST00000409190 GPHNQ9NQX3 736 aaPredicted RBP19.83■□□□□ 0.76
SYNC-202ENST00000409190 SNRKQ9NRH2 765 aa19.83■□□□□ 0.76
SYNC-202ENST00000409190 DDX19AQ9NUU7 478 aaKnown RBP19.83■□□□□ 0.76
SYNC-202ENST00000409190 ANKRD13DQ6ZTN6 518 aa19.83■□□□□ 0.76
SYNC-202ENST00000409190 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.76
SYNC-202ENST00000409190 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
SYNC-202ENST00000409190 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
SYNC-202ENST00000409190 LMBR1LQ6UX01 489 aa19.82■□□□□ 0.76
SYNC-202ENST00000409190 CABLES1Q8TDN4 633 aa19.82■□□□□ 0.76
SYNC-202ENST00000409190 NPHP4O75161 1426 aaPredicted RBP19.82■□□□□ 0.76
SYNC-202ENST00000409190 USP27XA6NNY8 438 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 KCNB2Q92953 911 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 PRDM4Q9UKN5 801 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 BIN1O00499 593 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 TTLL5Q6EMB2 1281 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 ZNF594Q96JF6 807 aaPredicted RBP19.81■□□□□ 0.76
SYNC-202ENST00000409190 GJB4Q9NTQ9 266 aa19.81■□□□□ 0.76
SYNC-202ENST00000409190 POLR3DP05423 398 aaPredicted RBP19.8■□□□□ 0.76
SYNC-202ENST00000409190 CHRNA2Q15822 529 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 TTC5Q8N0Z6 440 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 USP28Q96RU2 1077 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 PTPN12Q05209 780 aaKnown RBP19.8■□□□□ 0.76
SYNC-202ENST00000409190 RESTQ13127 1097 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 GOLPH3LQ9H4A5 285 aa19.8■□□□□ 0.76
SYNC-202ENST00000409190 CCDC73Q6ZRK6 1079 aa19.79■□□□□ 0.76
SYNC-202ENST00000409190 FKBP4Q02790 459 aaKnown RBP eCLIP19.78■□□□□ 0.76
SYNC-202ENST00000409190 ARHGEF25Q86VW2 580 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 SDF4Q9BRK5 362 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 ELP1O95163 1332 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 MED23Q9ULK4 1368 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 KINO60870 393 aaKnown RBP19.78■□□□□ 0.76
SYNC-202ENST00000409190 TPM3P06753 285 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 MCMDC2Q4G0Z9 681 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 FSIP1Q8NA03 581 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 A0A1B0GVL5 298 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 HMG20BQ9P0W2 317 aa19.78■□□□□ 0.76
SYNC-202ENST00000409190 CCDC112Q8NEF3 446 aa19.77■□□□□ 0.76
SYNC-202ENST00000409190 AOPEPQ8N6M6 819 aa19.77■□□□□ 0.76
SYNC-202ENST00000409190 METTL22Q9BUU2 404 aaPredicted RBP19.77■□□□□ 0.76
SYNC-202ENST00000409190 ZNF609O15014 1411 aa19.77■□□□□ 0.75
SYNC-202ENST00000409190 SF3A1Q15459 793 aaKnown RBP19.77■□□□□ 0.75
SYNC-202ENST00000409190 PTPN21Q16825 1174 aa19.77■□□□□ 0.75
SYNC-202ENST00000409190 SMAP1Q8IYB5 467 aaPredicted RBP19.77■□□□□ 0.75
SYNC-202ENST00000409190 CFAP45Q9UL16 551 aa19.77■□□□□ 0.75
SYNC-202ENST00000409190 LRRC37A3O60309 1634 aa19.76■□□□□ 0.75
SYNC-202ENST00000409190 GTF2F1P35269 517 aaKnown RBP eCLIP19.76■□□□□ 0.75
SYNC-202ENST00000409190 KRT32Q14532 448 aa19.76■□□□□ 0.75
SYNC-202ENST00000409190 ZBTB3Q9H5J0 574 aa19.76■□□□□ 0.75
SYNC-202ENST00000409190 STK11IPQ8N1F8 1099 aa19.75■□□□□ 0.75
SYNC-202ENST00000409190 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 SKILP12757 684 aa19.75■□□□□ 0.75
SYNC-202ENST00000409190 ATP5JP18859 108 aa19.75■□□□□ 0.75
SYNC-202ENST00000409190 NCBP1Q09161 790 aaKnown RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 WASHC4Q2M389 1173 aa19.75■□□□□ 0.75
SYNC-202ENST00000409190 PLA2G4DQ86XP0 818 aa19.75■□□□□ 0.75
SYNC-202ENST00000409190 NSUN7Q8NE18 718 aaKnown RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 ZSCAN20P17040 1043 aaPredicted RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 ZRSR1Q15695 479 aaKnown RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 TDRD7Q8NHU6 1098 aaKnown RBP19.75■□□□□ 0.75
SYNC-202ENST00000409190 CTDNEP1O95476 244 aa19.74■□□□□ 0.75
SYNC-202ENST00000409190 CACNA1FO60840 1977 aa19.74■□□□□ 0.75
SYNC-202ENST00000409190 SMC2O95347 1197 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 LRRC24Q50LG9 513 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 SLC52A2Q9HAB3 445 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 CCDC69A6NI79 296 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 GORABQ5T7V8 394 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 CEP135Q66GS9 1140 aa19.73■□□□□ 0.75
SYNC-202ENST00000409190 DHX32Q7L7V1 743 aaKnown RBP19.72■□□□□ 0.75
SYNC-202ENST00000409190 KRT28Q7Z3Y7 464 aa19.72■□□□□ 0.75
SYNC-202ENST00000409190 PAG1Q9NWQ8 432 aa19.72■□□□□ 0.75
SYNC-202ENST00000409190 RGPD2P0DJD1 1756 aa19.72■□□□□ 0.75
SYNC-202ENST00000409190 RXRAP19793 462 aa19.72■□□□□ 0.75
SYNC-202ENST00000409190 LRRC8AQ8IWT6 810 aa19.71■□□□□ 0.75
SYNC-202ENST00000409190 PUS3Q9BZE2 481 aaKnown RBP19.71■□□□□ 0.75
SYNC-202ENST00000409190 COPRSQ9NQ92 184 aa19.71■□□□□ 0.75
SYNC-202ENST00000409190 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
SYNC-202ENST00000409190 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
SYNC-202ENST00000409190 STX1AQ16623 288 aa19.71■□□□□ 0.75
SYNC-202ENST00000409190 HSP90AA4PQ58FG1 418 aa19.71■□□□□ 0.75
SYNC-202ENST00000409190 E7EWF7 191 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 IQCB1Q15051 598 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 TTLL7Q6ZT98 887 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 ANKLE2Q86XL3 938 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 IFIT1P09914 478 aaKnown RBP19.7■□□□□ 0.74
SYNC-202ENST00000409190 STK38Q15208 465 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 KBTBD3Q8NAB2 608 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 ZSCAN16Q9H4T2 348 aaPredicted RBP19.7■□□□□ 0.74
SYNC-202ENST00000409190 PTPN14Q15678 1187 aa19.7■□□□□ 0.74
SYNC-202ENST00000409190 ADD1P35611 737 aaKnown RBP19.69■□□□□ 0.74
SYNC-202ENST00000409190 PI16Q6UXB8 463 aa19.69■□□□□ 0.74
SYNC-202ENST00000409190 HAUS7Q99871 368 aa19.69■□□□□ 0.74
SYNC-202ENST00000409190 ZNF215Q9UL58 517 aaPredicted RBP19.69■□□□□ 0.74
SYNC-202ENST00000409190 ANKARQ7Z5J8 1434 aa19.69■□□□□ 0.74
SYNC-202ENST00000409190 MARCKSP29966 332 aaPredicted RBP19.69■□□□□ 0.74
SYNC-202ENST00000409190 A0A0U1RQG5 324 aaPredicted RBP19.69■□□□□ 0.74
SYNC-202ENST00000409190 SNRPA1P09661 255 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms