RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
PRAME-205ENST00000405655 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
PRAME-205ENST00000405655 UTP14AQ9BVJ6 771 aaKnown RBP16.97■□□□□ 0.31
PRAME-205ENST00000405655 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
PRAME-205ENST00000405655 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
PRAME-205ENST00000405655 LARGE1O95461 756 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 NTSR2O95665 410 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 KCNJ4P48050 445 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 NECTIN1Q15223 517 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 RUFY2Q8WXA3 655 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
PRAME-205ENST00000405655 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 ERFEQ4G0M1 354 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
PRAME-205ENST00000405655 SH3TC1Q8TE82 1336 aa16.96■□□□□ 0.3
PRAME-205ENST00000405655 MED23Q9ULK4 1368 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 GNPATO15228 680 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 PHF14O94880 888 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 MCM4P33991 863 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 AK2P54819 239 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 MAP4K1Q92918 833 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 SBF2Q86WG5 1849 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 SLC27A2O14975 620 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 EIF5BO60841 1220 aaKnown RBP16.95■□□□□ 0.3
PRAME-205ENST00000405655 ZAP70P43403 619 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 ANAPC15P60006 121 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 RAB3GAP1Q15042 981 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 TTC39AQ5SRH9 613 aa16.95■□□□□ 0.3
PRAME-205ENST00000405655 CCNL1Q9UK58 526 aaPredicted RBP16.95■□□□□ 0.3
PRAME-205ENST00000405655 ATP2B3Q16720 1220 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 KBTBD3Q8NAB2 608 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 GPR108Q9NPR9 543 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 CASZ1Q86V15 1759 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 TTC14Q96N46 770 aa16.94■□□□□ 0.3
PRAME-205ENST00000405655 GZF1Q9H116 711 aaPredicted RBP16.94■□□□□ 0.3
PRAME-205ENST00000405655 QTRT2Q9H974 415 aaKnown RBP16.94■□□□□ 0.3
PRAME-205ENST00000405655 AKAP11Q9UKA4 1901 aa16.93■□□□□ 0.3
PRAME-205ENST00000405655 LRRC4BQ9NT99 713 aa16.93■□□□□ 0.3
PRAME-205ENST00000405655 M0R2C6 588 aa16.92■□□□□ 0.3
PRAME-205ENST00000405655 MCAMP43121 646 aa16.92■□□□□ 0.3
PRAME-205ENST00000405655 PHKA1P46020 1223 aa16.92■□□□□ 0.3
PRAME-205ENST00000405655 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
PRAME-205ENST00000405655 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
PRAME-205ENST00000405655 BCORQ6W2J9 1755 aa16.91■□□□□ 0.3
PRAME-205ENST00000405655 OSBP2Q969R2 916 aa16.91■□□□□ 0.3
PRAME-205ENST00000405655 IL17RAQ96F46 866 aa16.91■□□□□ 0.3
PRAME-205ENST00000405655 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
PRAME-205ENST00000405655 NHSQ6T4R5 1651 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 BRWD3Q6RI45 1802 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 HIP1O00291 1037 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 PDE8BO95263 885 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 CCDC158Q5M9N0 1113 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 TTLL5Q6EMB2 1281 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
PRAME-205ENST00000405655 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
PRAME-205ENST00000405655 MCMDC2Q4G0Z9 681 aa16.89■□□□□ 0.3
PRAME-205ENST00000405655 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.3
PRAME-205ENST00000405655 LRRC2Q9BYS8 371 aa16.89■□□□□ 0.3
PRAME-205ENST00000405655 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.3
PRAME-205ENST00000405655 ABCC12Q96J65 1359 aa16.89■□□□□ 0.3
PRAME-205ENST00000405655 MAST3O60307 1309 aa16.89■□□□□ 0.29
PRAME-205ENST00000405655 PDRG1Q9NUG6 133 aa16.89■□□□□ 0.29
PRAME-205ENST00000405655 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 KCNB2Q92953 911 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 PIH1D3Q9NQM4 214 aaKnown RBP16.88■□□□□ 0.29
PRAME-205ENST00000405655 ATRNO75882 1429 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 CYP2E1P05181 493 aaPredicted RBP16.88■□□□□ 0.29
PRAME-205ENST00000405655 CCDC102BQ68D86 513 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 FAM196AQ6ZSG2 479 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 STOX1Q6ZVD7 989 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 PUS7LQ9H0K6 701 aaKnown RBP16.88■□□□□ 0.29
PRAME-205ENST00000405655 ZSWIM6Q9HCJ5 1215 aa16.88■□□□□ 0.29
PRAME-205ENST00000405655 TRPC5Q9UL62 973 aaPredicted RBP16.88■□□□□ 0.29
PRAME-205ENST00000405655 CIZ1Q9ULV3 898 aaPredicted RBP16.88■□□□□ 0.29
PRAME-205ENST00000405655 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 RNF113AO15541 343 aaKnown RBP16.87■□□□□ 0.29
PRAME-205ENST00000405655 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 TRIM37O94972 964 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 CYP21A2P08686 494 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 CUL4AQ13619 759 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 ZMYM1Q5SVZ6 1142 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 LAMA4Q16363 1823 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 FOXP2O15409 715 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 BCAMP50895 628 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 GSE1Q14687 1217 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 WASHC4Q2M389 1173 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
PRAME-205ENST00000405655 LAMB2P55268 1798 aa16.86■□□□□ 0.29
PRAME-205ENST00000405655 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
PRAME-205ENST00000405655 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
PRAME-205ENST00000405655 CYP46A1Q9Y6A2 500 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms