RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 TTLL5Q6EMB2 1281 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 CLSTN2Q9H4D0 955 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 SNRKQ9NRH2 765 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 TRMT1Q9NXH9 659 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF609O15014 1411 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 HAND2P61296 217 aa12.46□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF75DP51815 510 aa12.46□□□□□ -0.41
PPP4R1-203ENST00000400556 RESTQ13127 1097 aa12.46□□□□□ -0.42
PPP4R1-203ENST00000400556 ZSCAN25Q6NSZ9 544 aa12.46□□□□□ -0.42
PPP4R1-203ENST00000400556 PDCL2Q8N4E4 241 aa12.46□□□□□ -0.42
PPP4R1-203ENST00000400556 GOLPH3LQ9H4A5 285 aa12.46□□□□□ -0.42
PPP4R1-203ENST00000400556 USP27XA6NNY8 438 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 NPHP1O15259 732 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 TPD52L1Q16890 204 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 CCAR1Q8IX12 1150 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 USP28Q96RU2 1077 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 TNNT1P13805 278 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 ISM2Q6H9L7 571 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 DDX19AQ9NUU7 478 aaKnown RBP12.45□□□□□ -0.42
PPP4R1-203ENST00000400556 PTPDC1A2A3K4 754 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 ME1P48163 572 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 GOLGA6L19H0YKK7 550 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 PRDM4Q9UKN5 801 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 HDAC5Q9UQL6 1122 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 ELP1O95163 1332 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 POLR3DP05423 398 aaPredicted RBP12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 MCMDC2Q4G0Z9 681 aa12.44□□□□□ -0.42
PPP4R1-203ENST00000400556 BIN1O00499 593 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 CTDNEP1O95476 244 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 MTERF4Q7Z6M4 381 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 SLC52A2Q9HAB3 445 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 KIF13AQ9H1H9 1805 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 BECN2A8MW95 431 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 ATP5JP18859 108 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 RFX5P48382 616 aaPredicted RBP12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 NFAT5O94916 1531 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 FKBP4Q02790 459 aaKnown RBP eCLIP12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 HMG20BQ9P0W2 317 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 ARHGAP23Q9P227 1491 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 N4BP2Q86UW6 1770 aaPredicted RBP12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 A0A1B0GVL5 298 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 NSUN7Q8NE18 718 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-203ENST00000400556 MED1Q15648 1581 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 GTF2F1P35269 517 aaKnown RBP eCLIP12.42□□□□□ -0.428e-7■■□□□ 14.3
PPP4R1-203ENST00000400556 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 PLA2G4DQ86XP0 818 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 FSIP1Q8NA03 581 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 UTYO14607 1347 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 PUS3Q9BZE2 481 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 COPRSQ9NQ92 184 aa12.42□□□□□ -0.42
PPP4R1-203ENST00000400556 SLIT1O75093 1534 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 AOPEPQ8N6M6 819 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 HEG1Q9ULI3 1381 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 ERBB3P21860 1342 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 KRT32Q14532 448 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 ADD1P35611 737 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 NCBP1Q09161 790 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 CCDC73Q6ZRK6 1079 aa12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-203ENST00000400556 PHKG2P15735 406 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 USPL1Q5W0Q7 1092 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 SDF4Q9BRK5 362 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 KINO60870 393 aaKnown RBP12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 TATP17735 454 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 WASHC4Q2M389 1173 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 CFAP45Q9UL16 551 aa12.4□□□□□ -0.42
PPP4R1-203ENST00000400556 A1BGP04217 495 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 ZSCAN20P17040 1043 aaPredicted RBP12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 RXRAP19793 462 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 IQCB1Q15051 598 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 HAUS7Q99871 368 aa12.4□□□□□ -0.43
PPP4R1-203ENST00000400556 E7EWF7 191 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 CYP27B1O15528 508 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 TPM3P06753 285 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 SNRPA1P09661 255 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-203ENST00000400556 HSPD1P10809 573 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms