RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 TTLL6Q8N841 843 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 KLHDC4Q8TBB5 520 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 GRAPLQ8TC17 118 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-206ENST00000399042 FHDC1Q9C0D6 1143 aaPredicted RBP11.05□□□□□ -0.64
BRCC3-206ENST00000399042 PIM2Q9P1W9 311 aa11.05□□□□□ -0.64
BRCC3-206ENST00000399042 PA2G4Q9UQ80 394 aaKnown RBP11.05□□□□□ -0.64
BRCC3-206ENST00000399042 ANKRD36CQ5JPF3 1778 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 NUBP1P53384 320 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 MTX1Q13505 466 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 CRY2Q49AN0 593 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 DALRD3Q5D0E6 543 aaKnown RBP11.04□□□□□ -0.64
BRCC3-206ENST00000399042 METTL24Q5JXM2 366 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 SSH3Q8TE77 659 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 CELF1Q92879 486 aaKnown RBP11.04□□□□□ -0.64
BRCC3-206ENST00000399042 CRAMP1Q96RY5 1269 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 ANKIB1Q9P2G1 1089 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 EXOC6BQ9Y2D4 811 aa11.04□□□□□ -0.64
BRCC3-206ENST00000399042 C10orf71Q711Q0 1435 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 KLRG2A4D1S0 409 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-206ENST00000399042 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-206ENST00000399042 IL15P40933 162 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-206ENST00000399042 EVX2Q03828 476 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 HDAC1Q13547 482 aaPredicted RBP11.03□□□□□ -0.64
BRCC3-206ENST00000399042 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 CEP126Q9P2H0 1117 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 BCS1LQ9Y276 419 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
BRCC3-206ENST00000399042 RIC1Q4ADV7 1423 aa11.02□□□□□ -0.64
BRCC3-206ENST00000399042 EYA2O00167 538 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
BRCC3-206ENST00000399042 PTPN12Q05209 780 aaKnown RBP11.02□□□□□ -0.65
BRCC3-206ENST00000399042 ANKRD45Q5TZF3 282 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 PRPF40BQ6NWY9 871 aaKnown RBP11.02□□□□□ -0.65
BRCC3-206ENST00000399042 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 GCC1Q96CN9 775 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 ANKRD2Q9GZV1 360 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 COPRSQ9NQ92 184 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 BSDC1Q9NW68 430 aaPredicted RBP11.02□□□□□ -0.65
BRCC3-206ENST00000399042 RTL9Q8NET4 1388 aa11.02□□□□□ -0.65
BRCC3-206ENST00000399042 LRRC24Q50LG9 513 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 GORABQ5T7V8 394 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 NLGN2Q8NFZ4 835 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 HELBQ8NG08 1087 aaPredicted RBP11.01□□□□□ -0.65
BRCC3-206ENST00000399042 SYT17Q9BSW7 474 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 PUS3Q9BZE2 481 aaKnown RBP11.01□□□□□ -0.65
BRCC3-206ENST00000399042 NSFL1CQ9UNZ2 370 aaKnown RBP11.01□□□□□ -0.65
BRCC3-206ENST00000399042 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
BRCC3-206ENST00000399042 G3V3G9 751 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 C6orf229H3BNL8 230 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 C21orf2O43822 256 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 CIAO1O76071 339 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 IGHDP01880 384 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 RFX5P48382 616 aaPredicted RBP11□□□□□ -0.65
BRCC3-206ENST00000399042 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 SOGA3Q5TF21 947 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 DPP8Q6V1X1 898 aaPredicted RBP11□□□□□ -0.65
BRCC3-206ENST00000399042 CENPQQ7L2Z9 268 aaPredicted RBP11□□□□□ -0.65
BRCC3-206ENST00000399042 SP8Q8IXZ3 490 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 CLASRPQ8N2M8 674 aaKnown RBP11□□□□□ -0.65
BRCC3-206ENST00000399042 KIF1BPQ96EK5 621 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 LRRCC1Q9C099 1032 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 DCTPP1Q9H773 170 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 AKAP2Q9Y2D5 859 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 ATP6V0A2Q9Y487 856 aa11□□□□□ -0.65
BRCC3-206ENST00000399042 TAF5LO75529 589 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 IFIT2P09913 472 aaKnown RBP10.99□□□□□ -0.65
BRCC3-206ENST00000399042 CHRNDQ07001 517 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 TFCP2Q12800 502 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 GPR162Q16538 588 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 CC2D2BQ6DHV5 1058 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 VPS37DQ86XT2 251 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 MPNDQ8N594 471 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 IL1RAPL2Q9NP60 686 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
BRCC3-206ENST00000399042 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
BRCC3-206ENST00000399042 SMARCA5O60264 1052 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-206ENST00000399042 UFL1O94874 794 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 IFIT1P09914 478 aaKnown RBP10.98□□□□□ -0.65
BRCC3-206ENST00000399042 SLC5A1P13866 664 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 CCDC93Q567U6 631 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 RTKN2Q8IZC4 609 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 RHPN1Q8TCX5 695 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 RIPOR2Q9Y4F9 1068 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 XDHP47989 1333 aa10.98□□□□□ -0.65
BRCC3-206ENST00000399042 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
BRCC3-206ENST00000399042 FRAT2O75474 233 aaPredicted RBP10.97□□□□□ -0.65
BRCC3-206ENST00000399042 KCNA3P22001 575 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 GPSM2P81274 684 aa10.97□□□□□ -0.65
BRCC3-206ENST00000399042 PUM3Q15397 648 aaKnown RBP10.97□□□□□ -0.65
BRCC3-206ENST00000399042 ATP2B3Q16720 1220 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms