RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 KSR2Q6VAB6 950 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 OXER1Q8TDS5 423 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 SSH1Q8WYL5 1049 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
BRCC3-205ENST00000399026 METTL22Q9BUU2 404 aaPredicted RBP10.67□□□□□ -0.7
BRCC3-205ENST00000399026 TRMT112Q9UI30 125 aaKnown RBP10.67□□□□□ -0.7
BRCC3-205ENST00000399026 TAF1P21675 1872 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 TIAM2Q8IVF5 1701 aa10.67□□□□□ -0.7
BRCC3-205ENST00000399026 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
BRCC3-205ENST00000399026 HCLS1P14317 486 aaPredicted RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 CWF19L2Q2TBE0 894 aaKnown RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 POTEEQ6S8J3 1075 aa10.66□□□□□ -0.7
BRCC3-205ENST00000399026 MRPL50Q8N5N7 158 aaKnown RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 DNAAF4Q8WXU2 420 aa10.66□□□□□ -0.7
BRCC3-205ENST00000399026 JARID2Q92833 1246 aaPredicted RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 YTHDC1Q96MU7 727 aaKnown RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 LARP6Q9BRS8 491 aaKnown RBP10.66□□□□□ -0.7
BRCC3-205ENST00000399026 SMC4Q9NTJ3 1288 aa10.66□□□□□ -0.7
BRCC3-205ENST00000399026 PIM2Q9P1W9 311 aa10.66□□□□□ -0.7
BRCC3-205ENST00000399026 SH3TC1Q8TE82 1336 aa10.65□□□□□ -0.7
BRCC3-205ENST00000399026 SRGNP10124 158 aa10.65□□□□□ -0.7
BRCC3-205ENST00000399026 SLC51AQ86UW1 340 aa10.65□□□□□ -0.7
BRCC3-205ENST00000399026 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
BRCC3-205ENST00000399026 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
BRCC3-205ENST00000399026 CWC25Q9NXE8 425 aaPredicted RBP10.65□□□□□ -0.7
BRCC3-205ENST00000399026 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 RNF123Q5XPI4 1314 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 NEURL1BA8MQ27 555 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 NEXNQ0ZGT2 675 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 PRPF40BQ6NWY9 871 aaKnown RBP10.64□□□□□ -0.71
BRCC3-205ENST00000399026 TTLL6Q8N841 843 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 RNF166Q96A37 237 aaPredicted RBP10.64□□□□□ -0.71
BRCC3-205ENST00000399026 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
BRCC3-205ENST00000399026 KLRG2A4D1S0 409 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-205ENST00000399026 CT47B1P0C2W7 299 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-205ENST00000399026 NPR1P16066 1061 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 PBX2P40425 430 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
BRCC3-205ENST00000399026 RASSF7Q02833 373 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 ALDH1L2Q3SY69 923 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 STYK1Q6J9G0 422 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 CCDC191Q8NCU4 936 aa10.63□□□□□ -0.71
BRCC3-205ENST00000399026 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
BRCC3-205ENST00000399026 ABCC4O15439 1325 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 SBF1O95248 1867 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 CCDC88AQ3V6T2 1871 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 IRS4O14654 1257 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-205ENST00000399026 GRIN3BO60391 1043 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 PCCAP05165 728 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-205ENST00000399026 RARSP54136 660 aaKnown RBP10.62□□□□□ -0.71
BRCC3-205ENST00000399026 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
BRCC3-205ENST00000399026 OLFM4Q6UX06 510 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 ZBTB38Q8NAP3 1195 aaPredicted RBP10.62□□□□□ -0.71
BRCC3-205ENST00000399026 PDZRN3Q9UPQ7 1066 aa10.62□□□□□ -0.71
BRCC3-205ENST00000399026 PTPRCP08575 1304 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 C21orf2O43822 256 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 GCKRQ14397 625 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 MFSD10Q14728 455 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 BEND3Q5T5X7 828 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 ARHGAP27Q6ZUM4 889 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 UBE3BQ7Z3V4 1068 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 LINS1Q8NG48 757 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 DDX27Q96GQ7 796 aaKnown RBP10.61□□□□□ -0.71
BRCC3-205ENST00000399026 NLRP3Q96P20 1036 aa10.61□□□□□ -0.71
BRCC3-205ENST00000399026 CCDC85AQ96PX6 553 aaPredicted RBP10.61□□□□□ -0.71
BRCC3-205ENST00000399026 CDHR2Q9BYE9 1310 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 A0A1B0GUL6 1792 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 PPEF1O14829 653 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-205ENST00000399026 BCAR3O75815 825 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 SLC10A5Q5PT55 438 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 RBM17Q96I25 401 aaKnown RBP10.6□□□□□ -0.71
BRCC3-205ENST00000399026 NOB1Q9ULX3 412 aaKnown RBP10.6□□□□□ -0.71
BRCC3-205ENST00000399026 TNNQ9UQP3 1299 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 DUOX1Q9NRD9 1551 aa10.6□□□□□ -0.71
BRCC3-205ENST00000399026 KIF16BQ96L93 1317 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 LTBP1Q14766 1721 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 NFKBIEO00221 500 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 YY1P25490 414 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
BRCC3-205ENST00000399026 DICER1Q9UPY3 1922 aaKnown RBP10.58□□□□□ -0.72
BRCC3-205ENST00000399026 HOXA10P31260 410 aaPredicted RBP10.58□□□□□ -0.72
BRCC3-205ENST00000399026 PRELPP51888 382 aa10.58□□□□□ -0.72
BRCC3-205ENST00000399026 CASP7P55210 303 aa10.58□□□□□ -0.72
BRCC3-205ENST00000399026 CTSWP56202 376 aa10.58□□□□□ -0.72
BRCC3-205ENST00000399026 DDX46Q7L014 1031 aaKnown RBP10.58□□□□□ -0.72
BRCC3-205ENST00000399026 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
BRCC3-205ENST00000399026 H7C1W4 665 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 ARHGAP33O14559 1287 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 PDE8AO60658 829 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 ALDH1L1O75891 902 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 GRAPQ13588 217 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 CCDC93Q567U6 631 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 GRAPLQ8TC17 118 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms