RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ADCK5Q3MIX3 580 aa30.89■■■□□ 2.54
SHARPIN-202ENST00000398712 GORABQ5T7V8 394 aa30.89■■■□□ 2.54
SHARPIN-202ENST00000398712 RUFY3Q7L099 469 aa30.89■■■□□ 2.54
SHARPIN-202ENST00000398712 PDRG1Q9NUG6 133 aa30.89■■■□□ 2.54
SHARPIN-202ENST00000398712 PKP1Q13835 747 aa30.88■■■□□ 2.53
SHARPIN-202ENST00000398712 RPAP1Q9BWH6 1393 aaPredicted RBP30.88■■■□□ 2.53
SHARPIN-202ENST00000398712 RIC1Q4ADV7 1423 aa30.88■■■□□ 2.53
SHARPIN-202ENST00000398712 LDHAL6AQ6ZMR3 332 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 RIPOR2Q9Y4F9 1068 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 MYH14Q7Z406 1995 aaKnown RBP30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 PARP10Q53GL7 1025 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 TTC39AQ5SRH9 613 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 USPL1Q5W0Q7 1092 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 FNBP4Q8N3X1 1017 aaPredicted RBP30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 XAGE2Q96GT9 111 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 HELLSQ9NRZ9 838 aa30.87■■■□□ 2.53
SHARPIN-202ENST00000398712 CAMTA2O94983 1202 aa30.86■■■□□ 2.53
SHARPIN-202ENST00000398712 TSGA10IPQ3SY00 556 aa30.86■■■□□ 2.53
SHARPIN-202ENST00000398712 METTL24Q5JXM2 366 aa30.86■■■□□ 2.53
SHARPIN-202ENST00000398712 ABCC12Q96J65 1359 aa30.85■■■□□ 2.53
SHARPIN-202ENST00000398712 KCNQ2O43526 872 aa30.85■■■□□ 2.53
SHARPIN-202ENST00000398712 ZSCAN31Q96LW9 406 aaPredicted RBP30.85■■■□□ 2.53
SHARPIN-202ENST00000398712 ZDHHC9Q9Y397 364 aa30.85■■■□□ 2.53
SHARPIN-202ENST00000398712 U3KPZ7 1027 aaPredicted RBP30.85■■■□□ 2.53
SHARPIN-202ENST00000398712 LRRFIP1Q32MZ4 808 aaKnown RBP30.84■■■□□ 2.53
SHARPIN-202ENST00000398712 CNNM1Q9NRU3 951 aa30.84■■■□□ 2.53
SHARPIN-202ENST00000398712 ATP2B3Q16720 1220 aa30.84■■■□□ 2.53
SHARPIN-202ENST00000398712 UTP14AQ9BVJ6 771 aaKnown RBP30.84■■■□□ 2.53
SHARPIN-202ENST00000398712 HSP90B1P14625 803 aaKnown RBP30.83■■■□□ 2.53
SHARPIN-202ENST00000398712 CPA1P15085 419 aa30.83■■■□□ 2.53
SHARPIN-202ENST00000398712 KRT32Q14532 448 aa30.83■■■□□ 2.53
SHARPIN-202ENST00000398712 SH2B1Q9NRF2 756 aaPredicted RBP30.83■■■□□ 2.53
SHARPIN-202ENST00000398712 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.83■■■□□ 2.53
SHARPIN-202ENST00000398712 SUSD4Q5VX71 490 aa30.82■■■□□ 2.52
SHARPIN-202ENST00000398712 LRP5O75197 1615 aa30.82■■■□□ 2.52
SHARPIN-202ENST00000398712 BRD1O95696 1058 aa30.82■■■□□ 2.52
SHARPIN-202ENST00000398712 ADORA1P30542 326 aa30.82■■■□□ 2.52
SHARPIN-202ENST00000398712 ZMYM1Q5SVZ6 1142 aa30.82■■■□□ 2.52
SHARPIN-202ENST00000398712 BCORQ6W2J9 1755 aa30.81■■■□□ 2.52
SHARPIN-202ENST00000398712 BLOC1S2Q6QNY1 142 aa30.81■■■□□ 2.52
SHARPIN-202ENST00000398712 ZNF652Q9Y2D9 606 aa30.81■■■□□ 2.52
SHARPIN-202ENST00000398712 RNF113AO15541 343 aaKnown RBP30.8■■■□□ 2.52
SHARPIN-202ENST00000398712 SEC62Q99442 399 aaKnown RBP30.8■■■□□ 2.52
SHARPIN-202ENST00000398712 LAMB2P55268 1798 aa30.8■■■□□ 2.52
SHARPIN-202ENST00000398712 MCTP1Q6DN14 999 aa30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 CCDC129Q6ZRS4 1044 aa30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 ALDH8A1Q9H2A2 487 aaPredicted RBP30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 ANKRD1Q15327 319 aa30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 GZF1Q9H116 711 aaPredicted RBP30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 USP21Q9UK80 565 aa30.79■■■□□ 2.52
SHARPIN-202ENST00000398712 FKBP4Q02790 459 aaKnown RBP eCLIP30.78■■■□□ 2.52
SHARPIN-202ENST00000398712 DDX60Q8IY21 1712 aaKnown RBP30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 VGLL2Q8N8G2 317 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 DSCC1Q9BVC3 393 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 THSD7AQ9UPZ6 1657 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 MROH5Q6ZUA9 1318 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 CHGBP05060 677 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 ZFYP08048 801 aaPredicted RBP30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 RPS6KB1P23443 525 aa30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 NIP7Q9Y221 180 aaKnown RBP eCLIP30.77■■■□□ 2.52
SHARPIN-202ENST00000398712 PDE8BO95263 885 aa30.76■■■□□ 2.51
SHARPIN-202ENST00000398712 ZNF512BQ96KM6 892 aaPredicted RBP30.76■■■□□ 2.51
SHARPIN-202ENST00000398712 WDR33Q9C0J8 1336 aaKnown RBP30.75■■■□□ 2.51
SHARPIN-202ENST00000398712 CLEC4GQ6UXB4 293 aa30.75■■■□□ 2.51
SHARPIN-202ENST00000398712 HCLS1P14317 486 aaPredicted RBP30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 L1TD1Q5T7N2 865 aaKnown RBP30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 LINC00116Q8NCU8 138 aa30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 LARP6Q9BRS8 491 aaKnown RBP30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 SMC3Q9UQE7 1217 aa30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 CNTNAP4Q9C0A0 1308 aa30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 NTSR2O95665 410 aa30.74■■■□□ 2.51
SHARPIN-202ENST00000398712 RTL9Q8NET4 1388 aa30.73■■■□□ 2.51
SHARPIN-202ENST00000398712 ARAP2Q8WZ64 1704 aa30.73■■■□□ 2.51
SHARPIN-202ENST00000398712 FAM177BA6PVY3 158 aa30.73■■■□□ 2.51
SHARPIN-202ENST00000398712 KLHL40Q2TBA0 621 aa30.73■■■□□ 2.51
SHARPIN-202ENST00000398712 CCDC152Q4G0S7 254 aa30.73■■■□□ 2.51
SHARPIN-202ENST00000398712 MAST3O60307 1309 aa30.72■■■□□ 2.51
SHARPIN-202ENST00000398712 NHSQ6T4R5 1651 aa30.72■■■□□ 2.51
SHARPIN-202ENST00000398712 MYH7P12883 1935 aa30.72■■■□□ 2.51
SHARPIN-202ENST00000398712 RGL2O15211 777 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 LARGE1O95461 756 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 PUM3Q15397 648 aaKnown RBP30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 NEK1Q96PY6 1258 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 TAF6LQ9Y6J9 622 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 DDX49Q9Y6V7 483 aaKnown RBP30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 ZAP70P43403 619 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 LMBRD1Q9NUN5 540 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 BTAF1O14981 1849 aa30.71■■■□□ 2.51
SHARPIN-202ENST00000398712 CYP21A2P08686 494 aa30.7■■■□□ 2.51
SHARPIN-202ENST00000398712 SCARF1Q14162 830 aa30.7■■■□□ 2.51
SHARPIN-202ENST00000398712 CCDC83Q8IWF9 413 aa30.7■■■□□ 2.51
SHARPIN-202ENST00000398712 AKAP11Q9UKA4 1901 aa30.7■■■□□ 2.5
SHARPIN-202ENST00000398712 GOLGA6L3A6NEY3 463 aa30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 ME3Q16798 604 aa30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 FOXD4L5Q5VV16 416 aaPredicted RBP30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 FOXD4L4Q8WXT5 416 aaPredicted RBP30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 LPIN2Q92539 896 aa30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 MPHOSPH8Q99549 860 aa30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 TPCN1Q9ULQ1 816 aa30.69■■■□□ 2.5
SHARPIN-202ENST00000398712 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.69■■■□□ 2.55e-6■■■■■ 34.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms