RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 SH3TC1Q8TE82 1336 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 BRD1O95696 1058 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 MCMDC2Q4G0Z9 681 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 XAGE2Q96GT9 111 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
MBD1-209ENST00000398495 SKOR2Q2VWA4 1001 aaPredicted RBP18.31■□□□□ 0.52
MBD1-209ENST00000398495 USPL1Q5W0Q7 1092 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 AKAP2Q9Y2D5 859 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 PDE8AO60658 829 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.31■□□□□ 0.52
MBD1-209ENST00000398495 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
MBD1-209ENST00000398495 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
MBD1-209ENST00000398495 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 TTC39AQ5SRH9 613 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 VPS72Q15906 364 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 NGLY1Q96IV0 654 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
MBD1-209ENST00000398495 ZNF831Q5JPB2 1677 aa18.29■□□□□ 0.52
MBD1-209ENST00000398495 PSMA5P28066 241 aa18.29■□□□□ 0.52
MBD1-209ENST00000398495 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
MBD1-209ENST00000398495 LMBRD1Q9NUN5 540 aa18.29■□□□□ 0.52
MBD1-209ENST00000398495 LAMB2P55268 1798 aa18.29■□□□□ 0.52
MBD1-209ENST00000398495 SCARF1Q14162 830 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 ATP2B3Q16720 1220 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 CCDC158Q5M9N0 1113 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 ZMYM1Q5SVZ6 1142 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 SMARCC1Q92922 1105 aaPredicted RBP18.28■□□□□ 0.52
MBD1-209ENST00000398495 U3KPZ7 1027 aaPredicted RBP18.28■□□□□ 0.52
MBD1-209ENST00000398495 FSD2A1L4K1 749 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 ST3GAL1Q11201 340 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 CCDC83Q8IWF9 413 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 TCEANC2Q96MN5 208 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 CNNM1Q9NRU3 951 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 HELLSQ9NRZ9 838 aa18.28■□□□□ 0.52
MBD1-209ENST00000398495 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
MBD1-209ENST00000398495 HCLS1P14317 486 aaPredicted RBP18.27■□□□□ 0.52
MBD1-209ENST00000398495 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
MBD1-209ENST00000398495 TSGA10IPQ3SY00 556 aa18.27■□□□□ 0.52
MBD1-209ENST00000398495 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
MBD1-209ENST00000398495 VGLL2Q8N8G2 317 aa18.27■□□□□ 0.52
MBD1-209ENST00000398495 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.51
MBD1-209ENST00000398495 FKBP4Q02790 459 aaKnown RBP eCLIP18.27■□□□□ 0.51
MBD1-209ENST00000398495 ZSCAN31Q96LW9 406 aaPredicted RBP18.27■□□□□ 0.51
MBD1-209ENST00000398495 MAST3O60307 1309 aa18.27■□□□□ 0.51
MBD1-209ENST00000398495 ME3Q16798 604 aa18.26■□□□□ 0.51
MBD1-209ENST00000398495 SH2B1Q9NRF2 756 aaPredicted RBP18.26■□□□□ 0.51
MBD1-209ENST00000398495 TPCN1Q9ULQ1 816 aa18.26■□□□□ 0.51
MBD1-209ENST00000398495 LAMA4Q16363 1823 aa18.26■□□□□ 0.51
MBD1-209ENST00000398495 AKAP11Q9UKA4 1901 aa18.26■□□□□ 0.51
MBD1-209ENST00000398495 THSD7AQ9UPZ6 1657 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 M0R2C6 588 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 DTNBO60941 627 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 KLHL40Q2TBA0 621 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 TICAM2Q86XR7 235 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 LINC00116Q8NCU8 138 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 UTP14AQ9BVJ6 771 aaKnown RBP18.25■□□□□ 0.51
MBD1-209ENST00000398495 BRPF3Q9ULD4 1205 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.25■□□□□ 0.51
MBD1-209ENST00000398495 DDX49Q9Y6V7 483 aaKnown RBP18.25■□□□□ 0.51
MBD1-209ENST00000398495 ABCC12Q96J65 1359 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 MYH7P12883 1935 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 ZAP70P43403 619 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
MBD1-209ENST00000398495 PI16Q6UXB8 463 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 SMC3Q9UQE7 1217 aa18.25■□□□□ 0.51
MBD1-209ENST00000398495 CYP21A2P08686 494 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 TOB2Q14106 344 aaPredicted RBP18.24■□□□□ 0.51
MBD1-209ENST00000398495 PTF1AQ7RTS3 328 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 NECAB1Q8N987 351 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 AK7Q96M32 723 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 WDR33Q9C0J8 1336 aaKnown RBP18.24■□□□□ 0.51
MBD1-209ENST00000398495 PRPF40AO75400 957 aaKnown RBP18.24■□□□□ 0.51
MBD1-209ENST00000398495 NTSR2O95665 410 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 KRT32Q14532 448 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 PARP10Q53GL7 1025 aa18.24■□□□□ 0.51
MBD1-209ENST00000398495 ALDH8A1Q9H2A2 487 aaPredicted RBP18.24■□□□□ 0.51
MBD1-209ENST00000398495 BTAF1O14981 1849 aa18.23■□□□□ 0.51
MBD1-209ENST00000398495 KCNQ4P56696 695 aa18.23■□□□□ 0.51
MBD1-209ENST00000398495 FNBP4Q8N3X1 1017 aaPredicted RBP18.23■□□□□ 0.51
MBD1-209ENST00000398495 DSCC1Q9BVC3 393 aa18.23■□□□□ 0.51
MBD1-209ENST00000398495 NIP7Q9Y221 180 aaKnown RBP eCLIP18.23■□□□□ 0.51
MBD1-209ENST00000398495 STOX1Q6ZVD7 989 aa18.23■□□□□ 0.51
MBD1-209ENST00000398495 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
MBD1-209ENST00000398495 GJB2P29033 226 aa18.22■□□□□ 0.51
MBD1-209ENST00000398495 MCAMP43121 646 aa18.22■□□□□ 0.51
MBD1-209ENST00000398495 SEC31BQ9NQW1 1179 aa18.22■□□□□ 0.51
MBD1-209ENST00000398495 SCN7AQ01118 1682 aa18.22■□□□□ 0.51
MBD1-209ENST00000398495 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
MBD1-209ENST00000398495 COL4A1P02462 1669 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 A0A0G2JLW4 131 aa18.21■□□□□ 0.51
MBD1-209ENST00000398495 PDE8BO95263 885 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms