RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TCEAL9Q9UHQ7 104 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 SSH2Q76I76 1423 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 A0A1B0GVL5 298 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 ZHX3Q9H4I2 956 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 FLT4P35916 1363 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 MYL5Q02045 173 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 MICALCLQ6ZW33 695 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 BRAPQ7Z569 592 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 EHBP1Q8NDI1 1231 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
HPS4-202ENST00000398145 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
HPS4-202ENST00000398145 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
HPS4-202ENST00000398145 DENND4BO75064 1496 aaPredicted RBP12.69□□□□□ -0.38
HPS4-202ENST00000398145 SLC27A2O14975 620 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 ZBTB43O43298 467 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 DTNBO60941 627 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 SSBP05455 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
HPS4-202ENST00000398145 EYA1Q99502 592 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 TUBBP07437 444 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 SPAG1Q07617 926 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 CWF19L2Q2TBE0 894 aaKnown RBP12.68□□□□□ -0.38
HPS4-202ENST00000398145 CDC37L1Q7L3B6 337 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 CACNA2D4Q7Z3S7 1137 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
HPS4-202ENST00000398145 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.68□□□□□ -0.38
HPS4-202ENST00000398145 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 COPS6Q7L5N1 327 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 XAGE3Q8WTP9 111 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 IMPACTQ9P2X3 320 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 PIP4K2BP78356 416 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 LRMPQ12912 555 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 PYM1Q9BRP8 204 aaKnown RBP12.67□□□□□ -0.38
HPS4-202ENST00000398145 CWC25Q9NXE8 425 aaPredicted RBP12.67□□□□□ -0.38
HPS4-202ENST00000398145 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
HPS4-202ENST00000398145 PRC1O43663 620 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 CUL4AQ13619 759 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 CHST3Q7LGC8 479 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
HPS4-202ENST00000398145 MTMR6Q9Y217 621 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 KIAA0232Q92628 1395 aa12.67□□□□□ -0.38
HPS4-202ENST00000398145 SYNMO15061 1565 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 YTHDC2Q9H6S0 1430 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 CKAP4Q07065 602 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 KARSQ15046 597 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 TTF1Q15361 905 aaPredicted RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 SYCP1Q15431 976 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 ZFYVE27Q5T4F4 411 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 LMBR1LQ6UX01 489 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 ZNF518AQ6AHZ1 1483 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 RNF187Q5TA31 235 aaPredicted RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 BAG1Q99933 345 aaPredicted RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 STRN4Q9NRL3 753 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 VPS18Q9P253 973 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 SNRPA1P09661 255 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 MTIF2P46199 727 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 MNAT1P51948 309 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 FAM227BQ96M60 508 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 ALS2CR12Q96Q35 445 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 ZBTB3Q9H5J0 574 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 LZTFL1Q9NQ48 299 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 PAG1Q9NWQ8 432 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 BCORL1Q5H9F3 1711 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 RGS12O14924 1447 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 RANBP6O60518 1105 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 LDHAL6AQ6ZMR3 332 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 C10orf67Q8IYJ2 551 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 NAA15Q9BXJ9 866 aaKnown RBP12.66□□□□□ -0.38
HPS4-202ENST00000398145 RASSF4Q9H2L5 321 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 OSBPL3Q9H4L5 887 aa12.66□□□□□ -0.38
HPS4-202ENST00000398145 STARD3NLO95772 234 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 CARD6Q9BX69 1037 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 MAP3K19Q56UN5 1328 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 AFMP43652 599 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 GTF2A1P52655 376 aaPredicted RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 NLRP5P59047 1200 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 ME3Q16798 604 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 MAP3K5Q99683 1374 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 PHACTR2O75167 634 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 FGFR1OPO95684 399 aaKnown RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 BMP15O95972 392 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 DNA2P51530 1060 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 ZNF215Q9UL58 517 aaPredicted RBP12.65□□□□□ -0.38
HPS4-202ENST00000398145 PYCARDQ9ULZ3 195 aa12.65□□□□□ -0.38
HPS4-202ENST00000398145 DMTNQ08495 405 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms