RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 KIF3AQ9Y496 699 aa25.78■■□□□ 1.72
NFIX-203ENST00000397661 NPHP4O75161 1426 aaPredicted RBP25.78■■□□□ 1.72
NFIX-203ENST00000397661 FMNL2Q96PY5 1086 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 KCNF1Q9H3M0 494 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 RFX5P48382 616 aaPredicted RBP25.77■■□□□ 1.72
NFIX-203ENST00000397661 SCRN1Q12765 414 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 MCMDC2Q4G0Z9 681 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 SMAP1Q8IYB5 467 aaPredicted RBP25.77■■□□□ 1.72
NFIX-203ENST00000397661 ADGRL3Q9HAR2 1447 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 HEG1Q9ULI3 1381 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 ATP5JP18859 108 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 OTUD7BQ6GQQ9 843 aa25.77■■□□□ 1.72
NFIX-203ENST00000397661 ATP2B3Q16720 1220 aa25.76■■□□□ 1.71
NFIX-203ENST00000397661 PUS3Q9BZE2 481 aaKnown RBP25.76■■□□□ 1.71
NFIX-203ENST00000397661 CBX8Q9HC52 389 aa25.76■■□□□ 1.71
NFIX-203ENST00000397661 UTYO14607 1347 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 ATF3P18847 181 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 CCDC186Q7Z3E2 898 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 COPRSQ9NQ92 184 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 MED23Q9ULK4 1368 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 ZNF609O15014 1411 aa25.75■■□□□ 1.71
NFIX-203ENST00000397661 KDM6AO15550 1401 aaPredicted RBP25.75■■□□□ 1.71
NFIX-203ENST00000397661 BCL2L12Q9HB09 334 aa25.74■■□□□ 1.71
NFIX-203ENST00000397661 GTF3C6Q969F1 213 aa25.74■■□□□ 1.71
NFIX-203ENST00000397661 FAM200AQ8TCP9 573 aa25.74■■□□□ 1.71
NFIX-203ENST00000397661 SCAND2PQ9GZW5 306 aaPredicted RBP25.74■■□□□ 1.71
NFIX-203ENST00000397661 PRIMPOLQ96LW4 560 aa25.73■■□□□ 1.71
NFIX-203ENST00000397661 GORABQ5T7V8 394 aa25.72■■□□□ 1.71
NFIX-203ENST00000397661 NBPF26B4DH59 902 aa25.72■■□□□ 1.71
NFIX-203ENST00000397661 HMGN5P82970 282 aaKnown RBP25.72■■□□□ 1.71
NFIX-203ENST00000397661 WASHC4Q2M389 1173 aa25.72■■□□□ 1.71
NFIX-203ENST00000397661 NBPF14Q5TI25 921 aa25.72■■□□□ 1.71
NFIX-203ENST00000397661 NBPF10Q6P3W6 841 aaKnown RBP25.72■■□□□ 1.71
NFIX-203ENST00000397661 NBPF15Q8N660 670 aa25.72■■□□□ 1.71
NFIX-203ENST00000397661 MED1Q15648 1581 aaPredicted RBP25.72■■□□□ 1.71
NFIX-203ENST00000397661 KDM3BQ7LBC6 1761 aa25.71■■□□□ 1.71
NFIX-203ENST00000397661 ZNF165P49910 485 aa25.71■■□□□ 1.71
NFIX-203ENST00000397661 PAG1Q9NWQ8 432 aa25.71■■□□□ 1.71
NFIX-203ENST00000397661 HMG20BQ9P0W2 317 aa25.71■■□□□ 1.71
NFIX-203ENST00000397661 RIOK3O14730 519 aaKnown RBP25.71■■□□□ 1.71
NFIX-203ENST00000397661 GJB4Q9NTQ9 266 aa25.71■■□□□ 1.71
NFIX-203ENST00000397661 ZSCAN20P17040 1043 aaPredicted RBP25.7■■□□□ 1.7
NFIX-203ENST00000397661 HAUS7Q99871 368 aa25.7■■□□□ 1.7
NFIX-203ENST00000397661 U3KPZ7 1027 aaPredicted RBP25.7■■□□□ 1.7
NFIX-203ENST00000397661 IFIT1P09914 478 aaKnown RBP25.69■■□□□ 1.7
NFIX-203ENST00000397661 PI16Q6UXB8 463 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 DCAF5Q96JK2 942 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 C16orf45Q96MC5 204 aaPredicted RBP25.69■■□□□ 1.7
NFIX-203ENST00000397661 KRT32Q14532 448 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 LRP10Q7Z4F1 713 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 STRN4Q9NRL3 753 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 MEGF6O75095 1541 aa25.69■■□□□ 1.7
NFIX-203ENST00000397661 PTPDC1A2A3K4 754 aa25.68■■□□□ 1.7
NFIX-203ENST00000397661 U2AF2P26368 475 aaKnown RBP eCLIP25.68■■□□□ 1.7
NFIX-203ENST00000397661 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
NFIX-203ENST00000397661 TOM1L2Q6ZVM7 507 aa25.68■■□□□ 1.7
NFIX-203ENST00000397661 KBTBD3Q8NAB2 608 aa25.68■■□□□ 1.7
NFIX-203ENST00000397661 POLR3DP05423 398 aaPredicted RBP25.67■■□□□ 1.7
NFIX-203ENST00000397661 ME1P48163 572 aa25.67■■□□□ 1.7
NFIX-203ENST00000397661 ZNF592Q92610 1267 aa25.67■■□□□ 1.7
NFIX-203ENST00000397661 RESTQ13127 1097 aa25.67■■□□□ 1.7
NFIX-203ENST00000397661 ARID5BQ14865 1188 aa25.67■■□□□ 1.7
NFIX-203ENST00000397661 CCAR1Q8IX12 1150 aaKnown RBP25.67■■□□□ 1.7
NFIX-203ENST00000397661 PDCL2Q8N4E4 241 aa25.67■■□□□ 1.7
NFIX-203ENST00000397661 SYNE4Q8N205 404 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 NCAPD2Q15021 1401 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 A0A1B0GUL7 405 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 PLBD2Q8NHP8 589 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 USP28Q96RU2 1077 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 ADORA1P30542 326 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 CHAF1AQ13111 956 aaPredicted RBP25.66■■□□□ 1.7
NFIX-203ENST00000397661 ATG9AQ7Z3C6 839 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 KIAA1524Q8TCG1 905 aa25.66■■□□□ 1.7
NFIX-203ENST00000397661 A0A0G2JS52 829 aa25.65■■□□□ 1.7
NFIX-203ENST00000397661 A0A0U1RQG5 324 aaPredicted RBP25.65■■□□□ 1.7
NFIX-203ENST00000397661 GOLGA6L6A8MZA4 724 aa25.65■■□□□ 1.7
NFIX-203ENST00000397661 FOXO4P98177 505 aa25.65■■□□□ 1.7
NFIX-203ENST00000397661 HSPD1P10809 573 aaKnown RBP25.65■■□□□ 1.7
NFIX-203ENST00000397661 DHX32Q7L7V1 743 aaKnown RBP25.65■■□□□ 1.7
NFIX-203ENST00000397661 CLSTN2Q9H4D0 955 aa25.65■■□□□ 1.7
NFIX-203ENST00000397661 CWC25Q9NXE8 425 aaPredicted RBP25.65■■□□□ 1.7
NFIX-203ENST00000397661 CTDNEP1O95476 244 aa25.64■■□□□ 1.7
NFIX-203ENST00000397661 FAM89AQ96GI7 184 aa25.64■■□□□ 1.7
NFIX-203ENST00000397661 KAT6BQ8WYB5 2073 aa25.64■■□□□ 1.7
NFIX-203ENST00000397661 USPL1Q5W0Q7 1092 aa25.64■■□□□ 1.69
NFIX-203ENST00000397661 NSUN7Q8NE18 718 aaKnown RBP25.64■■□□□ 1.69
NFIX-203ENST00000397661 E7EWF7 191 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 TAF7LQ5H9L4 462 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 C11orf57Q6ZUT1 292 aaPredicted RBP25.63■■□□□ 1.69
NFIX-203ENST00000397661 FILIP1Q7Z7B0 1213 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 M0R2C6 588 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 ISM2Q6H9L7 571 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 GOLPH3LQ9H4A5 285 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 DDX19AQ9NUU7 478 aaKnown RBP25.63■■□□□ 1.69
NFIX-203ENST00000397661 SPTLC3Q9NUV7 552 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 RGPD5Q99666 1765 aa25.63■■□□□ 1.69
NFIX-203ENST00000397661 GOLGA6L19H0YKK7 550 aa25.62■■□□□ 1.69
NFIX-203ENST00000397661 DMTNQ08495 405 aa25.62■■□□□ 1.69
NFIX-203ENST00000397661 NPHP1O15259 732 aa25.62■■□□□ 1.69
NFIX-203ENST00000397661 RXRAP19793 462 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms