RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 MICAL1Q8TDZ2 1067 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.03□□□□□ -1.284e-7■■■■■ 57.7
GABPB1-204ENST00000396464 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
GABPB1-204ENST00000396464 USP17L15C9J2P7 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L10C9JJH3 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L13C9JLJ4 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L12C9JPN9 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L11C9JVI0 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L21D6R901 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L18D6R9N7 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L22D6RA61 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L17D6RBQ6 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L19D6RCP7 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L20D6RJB6 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 H2AFB1P0C5Y9 115 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 H2AFB2P0C5Z0 115 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 ARSDP51689 593 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 USP17L24Q0WX57 530 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 PTK7Q13308 1070 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 DGKZQ13574 1117 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 SHISA2Q6UWI4 295 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 FMR1NBQ8N0W7 255 aaPredicted RBP7.02□□□□□ -1.29
GABPB1-204ENST00000396464 TP53INP1Q96A56 240 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 ZFP64Q9NPA5 681 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
GABPB1-204ENST00000396464 FAM196BA6NMK8 535 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 RARAP10276 462 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 MSL1Q68DK7 614 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 WFDC8Q8IUA0 241 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 SERPINB4P48594 390 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 TAGLNQ01995 201 aaKnown RBP7.01□□□□□ -1.29
GABPB1-204ENST00000396464 ELOAQ14241 798 aaKnown RBP7.01□□□□□ -1.29
GABPB1-204ENST00000396464 DHX32Q7L7V1 743 aaKnown RBP7.01□□□□□ -1.29
GABPB1-204ENST00000396464 DTWD1Q8N5C7 304 aa7.01□□□□□ -1.29
GABPB1-204ENST00000396464 PLEKHD1A6NEE1 506 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 RAB11FIP3O75154 756 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 CLSTN1O94985 981 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 SSFA2P28290 1259 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 ERCC5P28715 1186 aaPredicted RBP7□□□□□ -1.29
GABPB1-204ENST00000396464 INPP5BP32019 993 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 MLLT1Q03111 559 aaPredicted RBP7□□□□□ -1.29
GABPB1-204ENST00000396464 ARTNQ5T4W7 220 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 PRDM16Q9HAZ2 1276 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 FRRS1LQ9P0K9 344 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
GABPB1-204ENST00000396464 BCS1LQ9Y276 419 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 RIPOR2Q9Y4F9 1068 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 PPME1Q9Y570 386 aa7□□□□□ -1.29
GABPB1-204ENST00000396464 LOC102724159A0A0B4J2E5 919 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 FOXO3O43524 673 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 SASH3O75995 380 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 MICAL2O94851 1124 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 TARSP26639 723 aaKnown RBP6.99□□□□□ -1.29
GABPB1-204ENST00000396464 PWP2Q15269 919 aaKnown RBP6.99□□□□□ -1.29
GABPB1-204ENST00000396464 TSNAXIP1Q2TAA8 658 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 C11orf91Q3C1V1 193 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 KANK4Q5T7N3 995 aaPredicted RBP6.99□□□□□ -1.29
GABPB1-204ENST00000396464 PSMG3-AS1Q96PY0 264 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 C11orf16Q9NQ32 467 aa6.99□□□□□ -1.29
GABPB1-204ENST00000396464 BIN2Q9UBW5 565 aaPredicted RBP6.99□□□□□ -1.29
GABPB1-204ENST00000396464 EIF2AK2P19525 551 aaKnown RBP6.98□□□□□ -1.29
GABPB1-204ENST00000396464 PERM1Q5SV97 790 aa6.98□□□□□ -1.29
GABPB1-204ENST00000396464 FBXO33Q7Z6M2 555 aa6.98□□□□□ -1.29
GABPB1-204ENST00000396464 NOP9Q86U38 636 aaKnown RBP6.98□□□□□ -1.29
GABPB1-204ENST00000396464 FAM200AQ8TCP9 573 aa6.98□□□□□ -1.29
GABPB1-204ENST00000396464 GPLD1P80108 840 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 FOXD4L6Q3SYB3 417 aaPredicted RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 FOXD4L3Q6VB84 417 aaPredicted RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 FBXO11Q86XK2 927 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 TRPM4Q8TD43 1214 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 DNAJC2Q99543 621 aaKnown RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 LNPKQ9C0E8 428 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 SMG9Q9H0W8 520 aaKnown RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 ZFATQ9P243 1243 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 SLAIN2Q9P270 581 aa6.97□□□□□ -1.29
GABPB1-204ENST00000396464 NOVA2Q9UNW9 492 aaKnown RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 TMA7Q9Y2S6 64 aaKnown RBP6.97□□□□□ -1.29
GABPB1-204ENST00000396464 HFE2Q6ZVN8 426 aa6.96□□□□□ -1.3
GABPB1-204ENST00000396464 CMTR1Q8N1G2 835 aaKnown RBP6.96□□□□□ -1.3
GABPB1-204ENST00000396464 WFDC12Q8WWY7 111 aa6.96□□□□□ -1.3
GABPB1-204ENST00000396464 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.3
GABPB1-204ENST00000396464 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.96□□□□□ -1.3
GABPB1-204ENST00000396464 SUGT1Q9Y2Z0 365 aa6.96□□□□□ -1.3
GABPB1-204ENST00000396464 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
GABPB1-204ENST00000396464 XYLBO75191 536 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 GHRHP01286 108 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 PSAPP07602 524 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 WEE1P30291 646 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 IREB2P48200 963 aaKnown RBP6.95□□□□□ -1.3
GABPB1-204ENST00000396464 LRP8Q14114 963 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 IGF2-ASQ6U949 168 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 RGL4Q8IZJ4 473 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 MYO19Q96H55 970 aa6.95□□□□□ -1.3
GABPB1-204ENST00000396464 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms