RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SBF1O95248 1867 aa23.98■■□□□ 1.43
HOXA9-202ENST00000396345 ANKIB1Q9P2G1 1089 aa23.97■■□□□ 1.43
HOXA9-202ENST00000396345 SUPT16HQ9Y5B9 1047 aaKnown RBP23.97■■□□□ 1.43
HOXA9-202ENST00000396345 CCDC88AQ3V6T2 1871 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 RFX5P48382 616 aaPredicted RBP23.96■■□□□ 1.43
HOXA9-202ENST00000396345 PRELPP51888 382 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 MTX1Q13505 466 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 C9orf131Q5VYM1 1079 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 SUPT20HQ8NEM7 779 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 RTFDC1Q9BY42 306 aaPredicted RBP23.96■■□□□ 1.43
HOXA9-202ENST00000396345 ZNF277Q9NRM2 450 aaPredicted RBP23.96■■□□□ 1.43
HOXA9-202ENST00000396345 CNNM1Q9NRU3 951 aa23.96■■□□□ 1.43
HOXA9-202ENST00000396345 XDHP47989 1333 aa23.95■■□□□ 1.42
HOXA9-202ENST00000396345 SRGAP3O43295 1099 aa23.95■■□□□ 1.42
HOXA9-202ENST00000396345 KLHDC4Q8TBB5 520 aa23.95■■□□□ 1.42
HOXA9-202ENST00000396345 PODXL2Q9NZ53 605 aa23.95■■□□□ 1.42
HOXA9-202ENST00000396345 RNF181Q9P0P0 153 aa23.95■■□□□ 1.42
HOXA9-202ENST00000396345 PUS3Q9BZE2 481 aaKnown RBP23.94■■□□□ 1.42
HOXA9-202ENST00000396345 ANKRD2Q9GZV1 360 aa23.94■■□□□ 1.42
HOXA9-202ENST00000396345 ZBTB40Q9NUA8 1239 aa23.94■■□□□ 1.42
HOXA9-202ENST00000396345 C6orf229H3BNL8 230 aa23.93■■□□□ 1.42
HOXA9-202ENST00000396345 IARSP41252 1262 aaKnown RBP23.93■■□□□ 1.42
HOXA9-202ENST00000396345 PTPN12Q05209 780 aaKnown RBP23.93■■□□□ 1.42
HOXA9-202ENST00000396345 CHRNDQ07001 517 aa23.93■■□□□ 1.42
HOXA9-202ENST00000396345 POLLQ9UGP5 575 aa23.93■■□□□ 1.42
HOXA9-202ENST00000396345 GGA1Q9UJY5 639 aa23.93■■□□□ 1.42
HOXA9-202ENST00000396345 LTBP1Q14766 1721 aa23.93■■□□□ 1.42
HOXA9-202ENST00000396345 DUOX1Q9NRD9 1551 aa23.92■■□□□ 1.42
HOXA9-202ENST00000396345 UFL1O94874 794 aa23.92■■□□□ 1.42
HOXA9-202ENST00000396345 ATP8B2P98198 1209 aa23.92■■□□□ 1.42
HOXA9-202ENST00000396345 TBC1D16Q8TBP0 767 aa23.92■■□□□ 1.42
HOXA9-202ENST00000396345 PNMA6EA0A0J9YXQ4 647 aa23.91■■□□□ 1.42
HOXA9-202ENST00000396345 ATP2B4P23634 1241 aa23.91■■□□□ 1.42
HOXA9-202ENST00000396345 LRRC24Q50LG9 513 aa23.91■■□□□ 1.42
HOXA9-202ENST00000396345 VPS33BQ9H267 617 aa23.91■■□□□ 1.42
HOXA9-202ENST00000396345 RIPOR2Q9Y4F9 1068 aa23.91■■□□□ 1.42
HOXA9-202ENST00000396345 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
HOXA9-202ENST00000396345 PPIP5K2O43314 1243 aa23.9■■□□□ 1.42
HOXA9-202ENST00000396345 HELBQ8NG08 1087 aaPredicted RBP23.9■■□□□ 1.42
HOXA9-202ENST00000396345 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
HOXA9-202ENST00000396345 EYA3Q99504 573 aa23.9■■□□□ 1.42
HOXA9-202ENST00000396345 COPRSQ9NQ92 184 aa23.9■■□□□ 1.42
HOXA9-202ENST00000396345 PA2G4Q9UQ80 394 aaKnown RBP23.9■■□□□ 1.42
HOXA9-202ENST00000396345 MROH5Q6ZUA9 1318 aa23.89■■□□□ 1.42
HOXA9-202ENST00000396345 EYA2O00167 538 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 TAF5LO75529 589 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 AOC3Q16853 763 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 WASHC4Q2M389 1173 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 CEP85Q6P2H3 762 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 LARGE2Q8N3Y3 721 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 SIL1Q9H173 461 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 FBXO3Q9UK99 471 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 LEMD3Q9Y2U8 911 aa23.89■■□□□ 1.41
HOXA9-202ENST00000396345 POLA2Q14181 598 aa23.88■■□□□ 1.41
HOXA9-202ENST00000396345 SSH3Q8TE77 659 aa23.88■■□□□ 1.41
HOXA9-202ENST00000396345 GPR101Q96P66 508 aaPredicted RBP23.88■■□□□ 1.41
HOXA9-202ENST00000396345 CIAO1O76071 339 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 KCNJ4P48050 445 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 KIAA2012Q0VF49 1180 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 METTL24Q5JXM2 366 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 JDP2Q8WYK2 163 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 A0A1B0GUL6 1792 aa23.87■■□□□ 1.41
HOXA9-202ENST00000396345 ZNF804BA4D1E1 1349 aa23.86■■□□□ 1.41
HOXA9-202ENST00000396345 WTIPA6NIX2 430 aaPredicted RBP23.86■■□□□ 1.41
HOXA9-202ENST00000396345 RIMBP2O15034 1052 aa23.86■■□□□ 1.41
HOXA9-202ENST00000396345 ATG9AQ7Z3C6 839 aa23.86■■□□□ 1.41
HOXA9-202ENST00000396345 RPAP2Q8IXW5 612 aaPredicted RBP23.86■■□□□ 1.41
HOXA9-202ENST00000396345 ZC3H12CQ9C0D7 883 aaKnown RBP23.86■■□□□ 1.41
HOXA9-202ENST00000396345 TIAM2Q8IVF5 1701 aa23.85■■□□□ 1.41
HOXA9-202ENST00000396345 ZC3H4Q9UPT8 1303 aaKnown RBP23.84■■□□□ 1.41
HOXA9-202ENST00000396345 IL15P40933 162 aaPredicted RBP23.84■■□□□ 1.41
HOXA9-202ENST00000396345 NIM1KQ8IY84 436 aa23.84■■□□□ 1.41
HOXA9-202ENST00000396345 COL4A5P29400 1685 aa23.83■■□□□ 1.41
HOXA9-202ENST00000396345 SNAP23O00161 211 aa23.83■■□□□ 1.41
HOXA9-202ENST00000396345 MED23Q9ULK4 1368 aa23.82■■□□□ 1.4
HOXA9-202ENST00000396345 PDE8BO95263 885 aa23.82■■□□□ 1.4
HOXA9-202ENST00000396345 G3BP1Q13283 466 aaKnown RBP eCLIP23.82■■□□□ 1.4
HOXA9-202ENST00000396345 UBE4AQ14139 1066 aa23.82■■□□□ 1.4
HOXA9-202ENST00000396345 VGLL2Q8N8G2 317 aa23.82■■□□□ 1.4
HOXA9-202ENST00000396345 CEP126Q9P2H0 1117 aa23.82■■□□□ 1.4
HOXA9-202ENST00000396345 G3V3G9 751 aa23.81■■□□□ 1.4
HOXA9-202ENST00000396345 HMMRO75330 724 aa23.81■■□□□ 1.4
HOXA9-202ENST00000396345 DCAF8Q5TAQ9 597 aa23.81■■□□□ 1.4
HOXA9-202ENST00000396345 SIRT2Q8IXJ6 389 aa23.81■■□□□ 1.4
HOXA9-202ENST00000396345 FZD9O00144 591 aa23.8■■□□□ 1.4
HOXA9-202ENST00000396345 SURF6O75683 361 aaKnown RBP23.8■■□□□ 1.4
HOXA9-202ENST00000396345 DOK7Q18PE1 504 aa23.8■■□□□ 1.4
HOXA9-202ENST00000396345 DBNDD1Q9H9R9 158 aa23.8■■□□□ 1.4
HOXA9-202ENST00000396345 ZNRF3Q9ULT6 936 aa23.8■■□□□ 1.4
HOXA9-202ENST00000396345 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
HOXA9-202ENST00000396345 KLRK1P26718 216 aa23.79■■□□□ 1.4
HOXA9-202ENST00000396345 TXNRD3Q86VQ6 643 aa23.79■■□□□ 1.4
HOXA9-202ENST00000396345 NOP58Q9Y2X3 529 aaKnown RBP23.79■■□□□ 1.4
HOXA9-202ENST00000396345 ECE2O60344 883 aa23.78■■□□□ 1.4
HOXA9-202ENST00000396345 EIF6P56537 245 aaKnown RBP23.78■■□□□ 1.4
HOXA9-202ENST00000396345 OS9Q13438 667 aaPredicted RBP23.78■■□□□ 1.4
HOXA9-202ENST00000396345 PUM3Q15397 648 aaKnown RBP23.78■■□□□ 1.4
HOXA9-202ENST00000396345 C15orf52Q6ZUT6 534 aaKnown RBP23.78■■□□□ 1.4
HOXA9-202ENST00000396345 EXOC6Q8TAG9 804 aa23.78■■□□□ 1.4
HOXA9-202ENST00000396345 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms