RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 RTL9Q8NET4 1388 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 AOC2O75106 756 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 PCCAP05165 728 aaPredicted RBP24.83■■□□□ 1.57
COL11A2-204ENST00000395194 ECE1P42892 770 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 TBC1D10BQ4KMP7 808 aaPredicted RBP24.83■■□□□ 1.57
COL11A2-204ENST00000395194 DLK2Q6UY11 383 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 EYA3Q99504 573 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 METTL22Q9BUU2 404 aaPredicted RBP24.83■■□□□ 1.57
COL11A2-204ENST00000395194 PGAP2Q9UHJ9 254 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 MAP3K2Q9Y2U5 619 aa24.83■■□□□ 1.57
COL11A2-204ENST00000395194 UFL1O94874 794 aa24.82■■□□□ 1.56
COL11A2-204ENST00000395194 DDX58O95786 925 aaKnown RBP24.82■■□□□ 1.56
COL11A2-204ENST00000395194 CCDC152Q4G0S7 254 aa24.82■■□□□ 1.56
COL11A2-204ENST00000395194 ANKIB1Q9P2G1 1089 aa24.82■■□□□ 1.56
COL11A2-204ENST00000395194 PDE8AO60658 829 aa24.81■■□□□ 1.56
COL11A2-204ENST00000395194 EGFRP00533 1210 aa24.81■■□□□ 1.56
COL11A2-204ENST00000395194 RBM26Q5T8P6 1007 aaKnown RBP24.81■■□□□ 1.56
COL11A2-204ENST00000395194 USP48Q86UV5 1035 aa24.81■■□□□ 1.56
COL11A2-204ENST00000395194 ZC3H15Q8WU90 426 aaKnown RBP24.81■■□□□ 1.56
COL11A2-204ENST00000395194 HSP90B1P14625 803 aaKnown RBP24.8■■□□□ 1.56
COL11A2-204ENST00000395194 CDC37L1Q7L3B6 337 aa24.8■■□□□ 1.56
COL11A2-204ENST00000395194 SAPCD2Q86UD0 394 aa24.8■■□□□ 1.56
COL11A2-204ENST00000395194 DPF2Q92785 391 aa24.8■■□□□ 1.56
COL11A2-204ENST00000395194 ZC3H12CQ9C0D7 883 aaKnown RBP24.79■■□□□ 1.56
COL11A2-204ENST00000395194 TSKSQ9UJT2 592 aa24.79■■□□□ 1.56
COL11A2-204ENST00000395194 GGA1Q9UJY5 639 aa24.79■■□□□ 1.56
COL11A2-204ENST00000395194 PSME4Q14997 1843 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 PI4KAP2A4QPH2 592 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 G3V3G9 751 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 DCAF8Q5TAQ9 597 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 PI4KAP1Q8N8J0 262 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 BEGAINQ9BUH8 593 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 PODXL2Q9NZ53 605 aa24.78■■□□□ 1.56
COL11A2-204ENST00000395194 IGKV5-2P06315 115 aa24.77■■□□□ 1.56
COL11A2-204ENST00000395194 STK31Q9BXU1 1019 aa24.77■■□□□ 1.56
COL11A2-204ENST00000395194 KSR2Q6VAB6 950 aa24.76■■□□□ 1.55
COL11A2-204ENST00000395194 G2E3Q7L622 706 aa24.76■■□□□ 1.55
COL11A2-204ENST00000395194 ANKRD18AQ8IVF6 992 aa24.76■■□□□ 1.55
COL11A2-204ENST00000395194 ADM5C9JUS6 153 aa24.75■■□□□ 1.55
COL11A2-204ENST00000395194 RPS12P25398 132 aaKnown RBP24.75■■□□□ 1.55
COL11A2-204ENST00000395194 CTSWP56202 376 aa24.75■■□□□ 1.55
COL11A2-204ENST00000395194 CWF19L2Q2TBE0 894 aaKnown RBP24.75■■□□□ 1.55
COL11A2-204ENST00000395194 KRT26Q7Z3Y9 468 aa24.75■■□□□ 1.55
COL11A2-204ENST00000395194 WWC1Q8IX03 1113 aa24.75■■□□□ 1.55
COL11A2-204ENST00000395194 TWISTNBQ3B726 338 aaPredicted RBP24.74■■□□□ 1.55
COL11A2-204ENST00000395194 CHMP4AQ9BY43 222 aa24.74■■□□□ 1.55
COL11A2-204ENST00000395194 CASP8AP2Q9UKL3 1982 aa24.74■■□□□ 1.55
COL11A2-204ENST00000395194 ASTN2O75129 1339 aaPredicted RBP24.73■■□□□ 1.55
COL11A2-204ENST00000395194 XDHP47989 1333 aa24.73■■□□□ 1.55
COL11A2-204ENST00000395194 NEXNQ0ZGT2 675 aa24.73■■□□□ 1.55
COL11A2-204ENST00000395194 KIF4BQ2VIQ3 1234 aa24.73■■□□□ 1.55
COL11A2-204ENST00000395194 WTIPA6NIX2 430 aaPredicted RBP24.72■■□□□ 1.55
COL11A2-204ENST00000395194 VIL1P09327 827 aaKnown RBP24.72■■□□□ 1.55
COL11A2-204ENST00000395194 MAP2K2P36507 400 aa24.72■■□□□ 1.55
COL11A2-204ENST00000395194 HUNKP57058 714 aa24.72■■□□□ 1.55
COL11A2-204ENST00000395194 DCPSQ96C86 337 aaKnown RBP24.72■■□□□ 1.55
COL11A2-204ENST00000395194 GREM2Q9H772 168 aa24.72■■□□□ 1.55
COL11A2-204ENST00000395194 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
COL11A2-204ENST00000395194 CCDC27Q2M243 656 aa24.71■■□□□ 1.55
COL11A2-204ENST00000395194 CDC5LQ99459 802 aaKnown RBP24.71■■□□□ 1.55
COL11A2-204ENST00000395194 GGA3Q9NZ52 723 aa24.71■■□□□ 1.55
COL11A2-204ENST00000395194 NEURL1BA8MQ27 555 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 SLC4A2P04920 1241 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 UBE3BQ7Z3V4 1068 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 TTLL11Q8NHH1 800 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 HHIPL1Q96JK4 782 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 MRS2Q9HD23 443 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 CACNA1FO60840 1977 aa24.7■■□□□ 1.54
COL11A2-204ENST00000395194 RSBN1LQ6PCB5 846 aaPredicted RBP24.69■■□□□ 1.54
COL11A2-204ENST00000395194 ATP2B4P23634 1241 aa24.68■■□□□ 1.54
COL11A2-204ENST00000395194 GBA2Q9HCG7 927 aaPredicted RBP24.68■■□□□ 1.54
COL11A2-204ENST00000395194 ZNF646O15015 1829 aaPredicted RBP24.67■■□□□ 1.54
COL11A2-204ENST00000395194 FANCIQ9NVI1 1328 aa24.66■■□□□ 1.54
COL11A2-204ENST00000395194 FLIIQ13045 1269 aa24.66■■□□□ 1.54
COL11A2-204ENST00000395194 SULF1Q8IWU6 871 aa24.66■■□□□ 1.54
COL11A2-204ENST00000395194 ABHD8Q96I13 439 aa24.66■■□□□ 1.54
COL11A2-204ENST00000395194 MINPP1Q9UNW1 487 aa24.66■■□□□ 1.54
COL11A2-204ENST00000395194 BRPF1P55201 1214 aaPredicted RBP24.65■■□□□ 1.54
COL11A2-204ENST00000395194 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
COL11A2-204ENST00000395194 C2orf69Q8N8R5 385 aa24.65■■□□□ 1.54
COL11A2-204ENST00000395194 AGBL3Q8NEM8 1001 aa24.65■■□□□ 1.54
COL11A2-204ENST00000395194 FBXW7Q969H0 707 aa24.65■■□□□ 1.54
COL11A2-204ENST00000395194 BSDC1Q9NW68 430 aaPredicted RBP24.65■■□□□ 1.54
COL11A2-204ENST00000395194 IL16Q14005 1332 aa24.64■■□□□ 1.54
COL11A2-204ENST00000395194 H7C1W4 665 aa24.64■■□□□ 1.54
COL11A2-204ENST00000395194 SCARF1Q14162 830 aa24.64■■□□□ 1.54
COL11A2-204ENST00000395194 ANGEL2Q5VTE6 544 aaKnown RBP24.64■■□□□ 1.54
COL11A2-204ENST00000395194 MXD3Q9BW11 206 aa24.64■■□□□ 1.54
COL11A2-204ENST00000395194 SCAF8Q9UPN6 1271 aaKnown RBP24.64■■□□□ 1.54
COL11A2-204ENST00000395194 MED23Q9ULK4 1368 aa24.64■■□□□ 1.53
COL11A2-204ENST00000395194 ZNF609O15014 1411 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 USP17L3A6NCW0 530 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 USP17L4A6NCW7 530 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 CCT4P50991 539 aaKnown RBP24.63■■□□□ 1.53
COL11A2-204ENST00000395194 ZNF280AP59817 542 aaPredicted RBP24.63■■□□□ 1.53
COL11A2-204ENST00000395194 NOGQ13253 232 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 GCKRQ14397 625 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 FAM161AQ3B820 660 aa24.63■■□□□ 1.53
COL11A2-204ENST00000395194 RGMBQ6NW40 437 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms