RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LTBP1Q14766 1721 aa24.96■■□□□ 1.59
SNCA-203ENST00000394986 WTIPA6NIX2 430 aaPredicted RBP24.95■■□□□ 1.59
SNCA-203ENST00000394986 C6orf229H3BNL8 230 aa24.95■■□□□ 1.59
SNCA-203ENST00000394986 PPIP5K2O43314 1243 aa24.95■■□□□ 1.59
SNCA-203ENST00000394986 KLHDC4Q8TBB5 520 aa24.95■■□□□ 1.59
SNCA-203ENST00000394986 TIAM2Q8IVF5 1701 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 UFL1O94874 794 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 LARGE2Q8N3Y3 721 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 ZNF784Q8NCA9 323 aaPredicted RBP24.95■■□□□ 1.58
SNCA-203ENST00000394986 SUPT20HQ8NEM7 779 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 TBC1D16Q8TBP0 767 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 PUS3Q9BZE2 481 aaKnown RBP24.95■■□□□ 1.58
SNCA-203ENST00000394986 PODXL2Q9NZ53 605 aa24.95■■□□□ 1.58
SNCA-203ENST00000394986 COG6Q9Y2V7 657 aa24.94■■□□□ 1.58
SNCA-203ENST00000394986 XDHP47989 1333 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 CCDC88AQ3V6T2 1871 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 MS4A1P11836 297 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 LDHAL6AQ6ZMR3 332 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.93■■□□□ 1.58
SNCA-203ENST00000394986 C1orf115Q9H7X2 142 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 GGA1Q9UJY5 639 aa24.93■■□□□ 1.58
SNCA-203ENST00000394986 RIMBP2O15034 1052 aa24.92■■□□□ 1.58
SNCA-203ENST00000394986 ZBTB7BO15156 539 aaPredicted RBP24.92■■□□□ 1.58
SNCA-203ENST00000394986 GNAI2P04899 355 aa24.92■■□□□ 1.58
SNCA-203ENST00000394986 CHRNDQ07001 517 aa24.92■■□□□ 1.58
SNCA-203ENST00000394986 CNNM1Q9NRU3 951 aa24.92■■□□□ 1.58
SNCA-203ENST00000394986 RFX5P48382 616 aaPredicted RBP24.91■■□□□ 1.58
SNCA-203ENST00000394986 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
SNCA-203ENST00000394986 HELBQ8NG08 1087 aaPredicted RBP24.91■■□□□ 1.58
SNCA-203ENST00000394986 HDAC5Q9UQL6 1122 aa24.91■■□□□ 1.58
SNCA-203ENST00000394986 ZC3H4Q9UPT8 1303 aaKnown RBP24.91■■□□□ 1.58
SNCA-203ENST00000394986 MVPQ14764 893 aaKnown RBP24.9■■□□□ 1.58
SNCA-203ENST00000394986 WASHC4Q2M389 1173 aa24.9■■□□□ 1.58
SNCA-203ENST00000394986 JDP2Q8WYK2 163 aa24.9■■□□□ 1.58
SNCA-203ENST00000394986 ZNF541Q9H0D2 1346 aa24.9■■□□□ 1.58
SNCA-203ENST00000394986 SNAP23O00161 211 aa24.89■■□□□ 1.58
SNCA-203ENST00000394986 TAF5LO75529 589 aa24.89■■□□□ 1.58
SNCA-203ENST00000394986 LRRC24Q50LG9 513 aa24.89■■□□□ 1.58
SNCA-203ENST00000394986 ATP2B4P23634 1241 aa24.88■■□□□ 1.57
SNCA-203ENST00000394986 RRP1P56182 461 aaKnown RBP24.88■■□□□ 1.57
SNCA-203ENST00000394986 NIM1KQ8IY84 436 aa24.88■■□□□ 1.57
SNCA-203ENST00000394986 ANKRD2Q9GZV1 360 aa24.88■■□□□ 1.57
SNCA-203ENST00000394986 DICER1Q9UPY3 1922 aaKnown RBP24.88■■□□□ 1.57
SNCA-203ENST00000394986 PTPN12Q05209 780 aaKnown RBP24.87■■□□□ 1.57
SNCA-203ENST00000394986 EYA3Q99504 573 aa24.87■■□□□ 1.57
SNCA-203ENST00000394986 PA2G4Q9UQ80 394 aaKnown RBP24.87■■□□□ 1.57
SNCA-203ENST00000394986 FZD9O00144 591 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 SRGAP3O43295 1099 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 KLRK1P26718 216 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 PDE3AQ14432 1141 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 SIL1Q9H173 461 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 VPS33BQ9H267 617 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 DBNDD1Q9H9R9 158 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 RIPOR2Q9Y4F9 1068 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 MTX1Q13505 466 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 DOK7Q18PE1 504 aa24.86■■□□□ 1.57
SNCA-203ENST00000394986 ZNF804BA4D1E1 1349 aa24.85■■□□□ 1.57
SNCA-203ENST00000394986 PNMA6EA0A0J9YXQ4 647 aa24.85■■□□□ 1.57
SNCA-203ENST00000394986 GLTPD2A6NH11 291 aa24.85■■□□□ 1.57
SNCA-203ENST00000394986 DDNO94850 711 aaPredicted RBP24.85■■□□□ 1.57
SNCA-203ENST00000394986 ZC3H12CQ9C0D7 883 aaKnown RBP24.85■■□□□ 1.57
SNCA-203ENST00000394986 GPBP1L1Q9HC44 474 aaPredicted RBP24.85■■□□□ 1.57
SNCA-203ENST00000394986 KCNJ4P48050 445 aa24.84■■□□□ 1.57
SNCA-203ENST00000394986 DDX19BQ9UMR2 479 aa24.84■■□□□ 1.57
SNCA-203ENST00000394986 LEMD3Q9Y2U8 911 aa24.84■■□□□ 1.57
SNCA-203ENST00000394986 YDJCA8MPS7 323 aa24.83■■□□□ 1.57
SNCA-203ENST00000394986 EYA2O00167 538 aa24.83■■□□□ 1.57
SNCA-203ENST00000394986 TXNRD3Q86VQ6 643 aa24.83■■□□□ 1.57
SNCA-203ENST00000394986 NMRK2Q9NPI5 230 aa24.83■■□□□ 1.57
SNCA-203ENST00000394986 ZNRF3Q9ULT6 936 aa24.83■■□□□ 1.57
SNCA-203ENST00000394986 MED23Q9ULK4 1368 aa24.82■■□□□ 1.56
SNCA-203ENST00000394986 A0A1B0GUL6 1792 aa24.82■■□□□ 1.56
SNCA-203ENST00000394986 ECE2O60344 883 aa24.82■■□□□ 1.56
SNCA-203ENST00000394986 EIF6P56537 245 aaKnown RBP24.82■■□□□ 1.56
SNCA-203ENST00000394986 METTL24Q5JXM2 366 aa24.82■■□□□ 1.56
SNCA-203ENST00000394986 DPY19L2Q6NUT2 758 aa24.82■■□□□ 1.56
SNCA-203ENST00000394986 MROH5Q6ZUA9 1318 aa24.81■■□□□ 1.56
SNCA-203ENST00000394986 KDM2BQ8NHM5 1336 aa24.81■■□□□ 1.56
SNCA-203ENST00000394986 ATG9AQ7Z3C6 839 aa24.81■■□□□ 1.56
SNCA-203ENST00000394986 COPRSQ9NQ92 184 aa24.8■■□□□ 1.56
SNCA-203ENST00000394986 KCNQ5Q9NR82 932 aa24.8■■□□□ 1.56
SNCA-203ENST00000394986 ZBTB40Q9NUA8 1239 aa24.8■■□□□ 1.56
SNCA-203ENST00000394986 GJA3Q9Y6H8 435 aa24.8■■□□□ 1.56
SNCA-203ENST00000394986 RAD17O75943 681 aa24.79■■□□□ 1.56
SNCA-203ENST00000394986 CXCL9Q07325 125 aa24.79■■□□□ 1.56
SNCA-203ENST00000394986 VGLL2Q8N8G2 317 aa24.79■■□□□ 1.56
SNCA-203ENST00000394986 IRS2Q9Y4H2 1338 aa24.79■■□□□ 1.56
SNCA-203ENST00000394986 G3V3G9 751 aa24.78■■□□□ 1.56
SNCA-203ENST00000394986 ATP8B2P98198 1209 aa24.78■■□□□ 1.56
SNCA-203ENST00000394986 DCAF8Q5TAQ9 597 aa24.78■■□□□ 1.56
SNCA-203ENST00000394986 CEP85Q6P2H3 762 aa24.78■■□□□ 1.56
SNCA-203ENST00000394986 RRAGCQ9HB90 399 aa24.78■■□□□ 1.56
SNCA-203ENST00000394986 CIAO1O76071 339 aa24.77■■□□□ 1.56
SNCA-203ENST00000394986 POLA2Q14181 598 aa24.77■■□□□ 1.56
SNCA-203ENST00000394986 GPC2Q8N158 579 aa24.77■■□□□ 1.56
SNCA-203ENST00000394986 POTECB2RU33 542 aa24.76■■□□□ 1.55
SNCA-203ENST00000394986 PDE8BO95263 885 aa24.76■■□□□ 1.55
SNCA-203ENST00000394986 CIAPIN1Q6FI81 312 aa24.76■■□□□ 1.55
SNCA-203ENST00000394986 SSH3Q8TE77 659 aa24.76■■□□□ 1.55
SNCA-203ENST00000394986 UBE4AQ14139 1066 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms