RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 RAPGEF1Q13905 1077 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 LRRC45Q96CN5 670 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 IFIT1BQ5T764 474 aaKnown RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 MIPOL1Q8TD10 442 aa13.91□□□□□ -0.18
SIN3A-202ENST00000394947 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.91□□□□□ -0.18
SIN3A-202ENST00000394947 TBC1D2Q9BYX2 928 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 DNAJC25Q9H1X3 360 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
SIN3A-202ENST00000394947 PPP1R12CQ9BZL4 782 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 CTAGE5O15320 804 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 IFI16Q16666 785 aaKnown RBP13.9□□□□□ -0.18
SIN3A-202ENST00000394947 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 GTF3C6Q969F1 213 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 TRIM7Q9C029 511 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 KLF18A0A0U1RQI7 1052 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 VIMP08670 466 aaKnown RBP13.9□□□□□ -0.18
SIN3A-202ENST00000394947 MCM7P33993 719 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 DIXDC1Q155Q3 683 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 BANK1Q8NDB2 785 aa13.9□□□□□ -0.18
SIN3A-202ENST00000394947 DACT3Q96B18 629 aaPredicted RBP13.9□□□□□ -0.18
SIN3A-202ENST00000394947 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.19
SIN3A-202ENST00000394947 FCHSD2O94868 740 aa13.9□□□□□ -0.19
SIN3A-202ENST00000394947 PDE4BQ07343 736 aa13.9□□□□□ -0.19
SIN3A-202ENST00000394947 MAEAQ7L5Y9 396 aa13.9□□□□□ -0.19
SIN3A-202ENST00000394947 UBXN1Q04323 297 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 TTC31Q49AM3 519 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 WDR63Q8IWG1 891 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 RNF34Q969K3 372 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 SKILP12757 684 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 KIF5BP33176 963 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 ZNF569Q5MCW4 686 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 LDHAL6AQ6ZMR3 332 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 PPME1Q9Y570 386 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 NEK1Q96PY6 1258 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 TRIM6Q9C030 488 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 NFE2L2Q16236 605 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 SH2B1Q9NRF2 756 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
SIN3A-202ENST00000394947 TTLL3Q9Y4R7 772 aa13.89□□□□□ -0.19
SIN3A-202ENST00000394947 SYT1P21579 422 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 ALG1Q9BT22 464 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 RUSC2Q8N2Y8 1516 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 ARFGAP3Q9NP61 516 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 FRMD4BQ9Y2L6 1034 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 SLC4A4Q9Y6R1 1079 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 CTAGE9A4FU28 777 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 GMNNO75496 209 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
SIN3A-202ENST00000394947 SARNPP82979 210 aaKnown RBP13.88□□□□□ -0.19
SIN3A-202ENST00000394947 TXNDC9O14530 226 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 GBP7Q8N8V2 638 aaPredicted RBP13.88□□□□□ -0.19
SIN3A-202ENST00000394947 NAPAP54920 295 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 LONRF3Q496Y0 759 aa13.88□□□□□ -0.19
SIN3A-202ENST00000394947 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 WTAPQ15007 396 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 WHAMMQ8TF30 809 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 DDX19AQ9NUU7 478 aaKnown RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 KRT222Q8N1A0 295 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 TTC12Q9H892 705 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 TBC1D9Q6ZT07 1266 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 ATP6V0A2Q9Y487 856 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 CYLC1P35663 651 aaPredicted RBP13.87□□□□□ -0.19
SIN3A-202ENST00000394947 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
SIN3A-202ENST00000394947 KIF3CO14782 793 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 CSPG5O95196 566 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 CCT6AP40227 531 aaKnown RBP13.86□□□□□ -0.19
SIN3A-202ENST00000394947 ZNF131P52739 623 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 CCDC122Q5T0U0 273 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 GKAP1Q5VSY0 366 aaPredicted RBP13.86□□□□□ -0.19
SIN3A-202ENST00000394947 E7EVH7 732 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 CYP7A1P22680 504 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 RFC4P35249 363 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 NCOA7Q8NI08 942 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 TRIM31Q9BZY9 425 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 GINS2Q9Y248 185 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 CHMP2AO43633 222 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 ZKSCAN3Q9BRR0 538 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.86□□□□□ -0.197e-7■■■□□ 17.3
SIN3A-202ENST00000394947 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 UBE3BQ7Z3V4 1068 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 USP48Q86UV5 1035 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 SLF2Q8IX21 1173 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 STMN2Q93045 179 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 KIFC2Q96AC6 838 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 KAT6BQ8WYB5 2073 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 BRF1Q92994 677 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
SIN3A-202ENST00000394947 DTNBO60941 627 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms