RNA–Protein interactions for RNA: ENST00000389797.7

LRCH1-202, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRCH1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-202ENST00000389797 COL5A2P05997 1499 aaPredicted RBP18.2■□□□□ 0.5
LRCH1-202ENST00000389797 CAVIN2O95810 425 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 PROSER3Q2NL68 480 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 TSGA10IPQ3SY00 556 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 PLA2G4DQ86XP0 818 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
LRCH1-202ENST00000389797 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
LRCH1-202ENST00000389797 LRMPQ12912 555 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 KRT32Q14532 448 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
LRCH1-202ENST00000389797 MED23Q9ULK4 1368 aa18.19■□□□□ 0.5
LRCH1-202ENST00000389797 GLI3P10071 1580 aa18.19■□□□□ 0.5
LRCH1-202ENST00000389797 NR1I2O75469 434 aa18.19■□□□□ 0.5
LRCH1-202ENST00000389797 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
LRCH1-202ENST00000389797 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 C16orf45Q96MC5 204 aaPredicted RBP18.18■□□□□ 0.5
LRCH1-202ENST00000389797 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
LRCH1-202ENST00000389797 NRBP1Q9UHY1 535 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 TAF6LQ9Y6J9 622 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.18■□□□□ 0.5
LRCH1-202ENST00000389797 KAZALD1Q96I82 304 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 GTPBP4Q9BZE4 634 aaKnown RBP18.18■□□□□ 0.5
LRCH1-202ENST00000389797 SIL1Q9H173 461 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 DNAJC25Q9H1X3 360 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 PGBD1Q96JS3 809 aa18.18■□□□□ 0.5
LRCH1-202ENST00000389797 UTYO14607 1347 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 SMTNL1A8MU46 457 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 H3BQV1 296 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 TNNT1P13805 278 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 SLC39A6Q13433 755 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 IFNL2Q8IZJ0 200 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 CLIP2Q9UDT6 1046 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 ZNF589Q86UQ0 364 aaPredicted RBP18.17■□□□□ 0.5
LRCH1-202ENST00000389797 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 CFAP45Q9UL16 551 aa18.17■□□□□ 0.5
LRCH1-202ENST00000389797 TAF5LO75529 589 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 PRDM11Q9NQV5 511 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 BRF1Q92994 677 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 ZSCAN16Q9H4T2 348 aaPredicted RBP18.16■□□□□ 0.5
LRCH1-202ENST00000389797 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 GOLGA6L19H0YKK7 550 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 JAK2O60674 1132 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 PDIA6Q15084 440 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 SYCP1Q15431 976 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 NEK1Q96PY6 1258 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 PAXBP1Q9Y5B6 917 aa18.16■□□□□ 0.5
LRCH1-202ENST00000389797 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
LRCH1-202ENST00000389797 RESTQ13127 1097 aa18.15■□□□□ 0.5
LRCH1-202ENST00000389797 ZHX1Q9UKY1 873 aaPredicted RBP18.15■□□□□ 0.5
LRCH1-202ENST00000389797 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
LRCH1-202ENST00000389797 FEZ1Q99689 392 aa18.15■□□□□ 0.5
LRCH1-202ENST00000389797 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
LRCH1-202ENST00000389797 U2AF2P26368 475 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■■■□□ 17
LRCH1-202ENST00000389797 TPD52L1Q16890 204 aaPredicted RBP18.15■□□□□ 0.5
LRCH1-202ENST00000389797 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
LRCH1-202ENST00000389797 JCADQ9P266 1359 aa18.14■□□□□ 0.5
LRCH1-202ENST00000389797 CDC25BP30305 580 aa18.14■□□□□ 0.49
LRCH1-202ENST00000389797 DCAF5Q96JK2 942 aa18.14■□□□□ 0.49
LRCH1-202ENST00000389797 NCBP1Q09161 790 aaKnown RBP18.14■□□□□ 0.49
LRCH1-202ENST00000389797 CCDC112Q8NEF3 446 aa18.14■□□□□ 0.49
LRCH1-202ENST00000389797 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
LRCH1-202ENST00000389797 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
LRCH1-202ENST00000389797 CTAGE5O15320 804 aa18.13■□□□□ 0.49
LRCH1-202ENST00000389797 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
LRCH1-202ENST00000389797 Q6ZUG5 572 aa18.12■□□□□ 0.49
LRCH1-202ENST00000389797 KLHDC4Q8TBB5 520 aa18.12■□□□□ 0.49
LRCH1-202ENST00000389797 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
LRCH1-202ENST00000389797 U3KPZ7 1027 aaPredicted RBP18.12■□□□□ 0.49
LRCH1-202ENST00000389797 EDC3Q96F86 508 aaKnown RBP18.12■□□□□ 0.49
LRCH1-202ENST00000389797 NEMFO60524 1076 aa18.11■□□□□ 0.49
LRCH1-202ENST00000389797 SARM1Q6SZW1 724 aa18.11■□□□□ 0.49
LRCH1-202ENST00000389797 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
LRCH1-202ENST00000389797 ATP5JP18859 108 aa18.11■□□□□ 0.49
LRCH1-202ENST00000389797 CCDC144BQ3MJ40 725 aa18.11■□□□□ 0.49
LRCH1-202ENST00000389797 CCDC144CPQ8IYA2 1237 aa18.11■□□□□ 0.49
LRCH1-202ENST00000389797 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 IQCB1Q15051 598 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 STX1AQ16623 288 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 CEBPZQ03701 1054 aaKnown RBP18.1■□□□□ 0.49
LRCH1-202ENST00000389797 TOM1L2Q6ZVM7 507 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 LRP10Q7Z4F1 713 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 MRFAP1L1Q96HT8 127 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 OGFRQ9NZT2 677 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 LAMB4A4D0S4 1761 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 BECN2A8MW95 431 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 LRRC8AQ8IWT6 810 aa18.1■□□□□ 0.49
LRCH1-202ENST00000389797 SECISBP2LQ93073 1101 aaKnown RBP18.1■□□□□ 0.49
LRCH1-202ENST00000389797 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
LRCH1-202ENST00000389797 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
LRCH1-202ENST00000389797 KIF20AO95235 890 aa18.09■□□□□ 0.49
LRCH1-202ENST00000389797 CCDC73Q6ZRK6 1079 aa18.09■□□□□ 0.49
LRCH1-202ENST00000389797 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
LRCH1-202ENST00000389797 CEP135Q66GS9 1140 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms