RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 JAKMIP3Q5VZ66 844 aa19.75■□□□□ 0.75
SGCB-201ENST00000381431 CRACR2AQ9BSW2 395 aa19.75■□□□□ 0.75
SGCB-201ENST00000381431 C6orf229H3BNL8 230 aa19.75■□□□□ 0.75
SGCB-201ENST00000381431 GSPT1P15170 499 aaKnown RBP19.75■□□□□ 0.75
SGCB-201ENST00000381431 SLC4A4Q9Y6R1 1079 aa19.75■□□□□ 0.75
SGCB-201ENST00000381431 SNX14Q9Y5W7 946 aa19.75■□□□□ 0.75
SGCB-201ENST00000381431 N4BP3O15049 544 aa19.74■□□□□ 0.75
SGCB-201ENST00000381431 ACSBG1Q96GR2 724 aa19.74■□□□□ 0.75
SGCB-201ENST00000381431 MTIF2P46199 727 aaKnown RBP19.73■□□□□ 0.75
SGCB-201ENST00000381431 RTN1Q16799 776 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.73■□□□□ 0.75
SGCB-201ENST00000381431 KDM6BO15054 1643 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 TDRD12Q587J7 1177 aaKnown RBP19.73■□□□□ 0.75
SGCB-201ENST00000381431 TXLNBQ8N3L3 684 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 NGLY1Q96IV0 654 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 DNAI1Q9UI46 699 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 RNF113AO15541 343 aaKnown RBP19.73■□□□□ 0.75
SGCB-201ENST00000381431 TAF4BQ92750 862 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 CGNQ9P2M7 1197 aaKnown RBP19.73■□□□□ 0.75
SGCB-201ENST00000381431 TBX22Q9Y458 520 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 INSRP06213 1382 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 ZNF790Q6PG37 636 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 FBXO3Q9UK99 471 aa19.73■□□□□ 0.75
SGCB-201ENST00000381431 ERLIN2O94905 339 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 TRERF1Q96PN7 1200 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 TCP11L1Q9NUJ3 509 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
SGCB-201ENST00000381431 TRMT1LQ7Z2T5 733 aaKnown RBP19.72■□□□□ 0.75
SGCB-201ENST00000381431 TRMT2AQ8IZ69 625 aaKnown RBP19.72■□□□□ 0.75
SGCB-201ENST00000381431 CHAMP1Q96JM3 812 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 YEATS4O95619 227 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 MAPK8IP2Q13387 824 aaPredicted RBP19.72■□□□□ 0.75
SGCB-201ENST00000381431 IQCEQ6IPM2 695 aa19.72■□□□□ 0.75
SGCB-201ENST00000381431 MIGA1Q8NAN2 632 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 CCDC12Q8WUD4 166 aaPredicted RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 KAT14Q9H8E8 782 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 ZNF219Q9P2Y4 722 aaPredicted RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 KIF5BP33176 963 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 PDE4BQ07343 736 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 DCAF5Q96JK2 942 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 GADD45BO75293 160 aaPredicted RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 NCOA5Q9HCD5 579 aaKnown RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 ZHX1Q9UKY1 873 aaPredicted RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
SGCB-201ENST00000381431 ABCC2Q92887 1545 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 A0A1B0GVL5 298 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 TAX1BP1Q86VP1 789 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 ESR2Q92731 530 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
SGCB-201ENST00000381431 SAMD9Q5K651 1589 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 PKP1Q13835 747 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 CCDC152Q4G0S7 254 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 CCDC150Q8NCX0 1101 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
SGCB-201ENST00000381431 RAB34Q9BZG1 259 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 GBP3Q9H0R5 595 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 LMBRD1Q9NUN5 540 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 ZNF521Q96K83 1311 aa19.7■□□□□ 0.74
SGCB-201ENST00000381431 SLC27A2O14975 620 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 PAXBP1Q9Y5B6 917 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 MAST1Q9Y2H9 1570 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 SUCLG2Q96I99 432 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 KRT23Q9C075 422 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 RTL1A6NKG5 1358 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 NIP7Q9Y221 180 aaKnown RBP eCLIP19.69■□□□□ 0.74
SGCB-201ENST00000381431 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 IFIT1BQ5T764 474 aaKnown RBP19.69■□□□□ 0.74
SGCB-201ENST00000381431 KANK3Q6NY19 840 aa19.69■□□□□ 0.74
SGCB-201ENST00000381431 RPGRQ92834 1020 aaKnown RBP19.69■□□□□ 0.74
SGCB-201ENST00000381431 ZNF594Q96JF6 807 aaPredicted RBP19.69■□□□□ 0.74
SGCB-201ENST00000381431 RAD50Q92878 1312 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 OTUD7BQ6GQQ9 843 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 ZBTB9Q96C00 473 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 TMEM63CQ9P1W3 806 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 HS1BP3Q53T59 392 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 DHX37Q8IY37 1157 aaKnown RBP19.68■□□□□ 0.74
SGCB-201ENST00000381431 SBNO1A3KN83 1393 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 ABCC4O15439 1325 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 IRS4O14654 1257 aaPredicted RBP19.68■□□□□ 0.74
SGCB-201ENST00000381431 KCNQ3O43525 872 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 KIAA0754O94854 1291 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 PALD1Q9ULE6 856 aa19.68■□□□□ 0.74
SGCB-201ENST00000381431 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 DHX58Q96C10 678 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 MBD5Q9P267 1494 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 NEFHP12036 1026 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 RPS6KB1P23443 525 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 STX17P56962 302 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 TNNI3KQ59H18 835 aa19.67■□□□□ 0.74
SGCB-201ENST00000381431 NBPF5PQ86XG9 351 aaPredicted RBP19.67■□□□□ 0.74
SGCB-201ENST00000381431 C17orf53Q8N3J3 647 aaPredicted RBP19.67■□□□□ 0.74
SGCB-201ENST00000381431 TMOD2Q9NZR1 351 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms