RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 SPTLC3Q9NUV7 552 aa19.28■□□□□ 0.68
VPS16-203ENST00000380469 CKAP2LQ8IYA6 745 aa19.27■□□□□ 0.68
VPS16-203ENST00000380469 BICD2Q8TD16 824 aa19.27■□□□□ 0.68
VPS16-203ENST00000380469 LLPHQ9BRT6 129 aaKnown RBP19.27■□□□□ 0.68
VPS16-203ENST00000380469 CLSTN2Q9H4D0 955 aa19.27■□□□□ 0.68
VPS16-203ENST00000380469 HELLSQ9NRZ9 838 aa19.27■□□□□ 0.68
VPS16-203ENST00000380469 CFAP45Q9UL16 551 aa19.27■□□□□ 0.68
VPS16-203ENST00000380469 CCDC9Q9Y3X0 531 aaKnown RBP19.27■□□□□ 0.68
VPS16-203ENST00000380469 H7C1W4 665 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
VPS16-203ENST00000380469 RESTQ13127 1097 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 CHRNA2Q15822 529 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 MTERF4Q7Z6M4 381 aaKnown RBP19.26■□□□□ 0.67
VPS16-203ENST00000380469 CABLES1Q8TDN4 633 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 ADAMTSL3P82987 1691 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 CHGBP05060 677 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 FOXO4P98177 505 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 TICAM2Q86XR7 235 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 SPC24Q8NBT2 197 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 MYRIPQ8NFW9 859 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
VPS16-203ENST00000380469 PAG1Q9NWQ8 432 aa19.26■□□□□ 0.67
VPS16-203ENST00000380469 GOLIM4O00461 696 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 DHX32Q7L7V1 743 aaKnown RBP19.25■□□□□ 0.67
VPS16-203ENST00000380469 DDX11Q96FC9 970 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 GPR108Q9NPR9 543 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 CWC25Q9NXE8 425 aaPredicted RBP19.25■□□□□ 0.67
VPS16-203ENST00000380469 COL18A1P39060 1754 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 PFKFB2O60825 505 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 ANO6Q4KMQ2 910 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 RBM43Q6ZSC3 357 aaKnown RBP19.25■□□□□ 0.67
VPS16-203ENST00000380469 KIF3AQ9Y496 699 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 PALLDQ8WX93 1383 aa19.25■□□□□ 0.67
VPS16-203ENST00000380469 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
VPS16-203ENST00000380469 SCRN1Q12765 414 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 C17orf53Q8N3J3 647 aaPredicted RBP19.24■□□□□ 0.67
VPS16-203ENST00000380469 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 ATG9AQ7Z3C6 839 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 LUZP1Q86V48 1076 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 SMARCC2Q8TAQ2 1214 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 PGBD1Q96JS3 809 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 CBX8Q9HC52 389 aa19.24■□□□□ 0.67
VPS16-203ENST00000380469 NR1I2O75469 434 aa19.23■□□□□ 0.67
VPS16-203ENST00000380469 STOX1Q6ZVD7 989 aa19.23■□□□□ 0.67
VPS16-203ENST00000380469 KIAA1524Q8TCG1 905 aa19.23■□□□□ 0.67
VPS16-203ENST00000380469 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 TIMM10P62072 90 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 NBPF14Q5TI25 921 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 NAA16Q6N069 864 aaPredicted RBP19.22■□□□□ 0.67
VPS16-203ENST00000380469 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
VPS16-203ENST00000380469 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 KCNF1Q9H3M0 494 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 PKD1L3Q7Z443 1732 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 ZMYM1Q5SVZ6 1142 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
VPS16-203ENST00000380469 CHMP4CQ96CF2 233 aa19.21■□□□□ 0.67
VPS16-203ENST00000380469 CAVIN2O95810 425 aa19.2■□□□□ 0.66
VPS16-203ENST00000380469 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
VPS16-203ENST00000380469 DRC7Q8IY82 874 aa19.2■□□□□ 0.66
VPS16-203ENST00000380469 NSUN7Q8NE18 718 aaKnown RBP19.2■□□□□ 0.66
VPS16-203ENST00000380469 EYA2O00167 538 aa19.2■□□□□ 0.66
VPS16-203ENST00000380469 IFIT1P09914 478 aaKnown RBP19.2■□□□□ 0.66
VPS16-203ENST00000380469 EXOSC10Q01780 885 aaKnown RBP19.2■□□□□ 0.66
VPS16-203ENST00000380469 APOBRQ0VD83 1088 aa19.2■□□□□ 0.66
VPS16-203ENST00000380469 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 RNF113AO15541 343 aaKnown RBP19.19■□□□□ 0.66
VPS16-203ENST00000380469 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 PYCARDQ9ULZ3 195 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 E7EWF7 191 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 HSPD1P10809 573 aaKnown RBP19.19■□□□□ 0.66
VPS16-203ENST00000380469 ZNF165P49910 485 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 TDRD7Q8NHU6 1098 aaKnown RBP19.19■□□□□ 0.66
VPS16-203ENST00000380469 TRIM5Q9C035 493 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 NAP1L2Q9ULW6 460 aaPredicted RBP19.19■□□□□ 0.66
VPS16-203ENST00000380469 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
VPS16-203ENST00000380469 PTPDC1A2A3K4 754 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 CHAF1AQ13111 956 aaPredicted RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 ATL3Q6DD88 541 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 VSIG10Q8N0Z9 540 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 ZNF396Q96N95 335 aaPredicted RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 ATG3Q9NT62 314 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 CTAGE5O15320 804 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 CIAO1O76071 339 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 LRRFIP1Q32MZ4 808 aaKnown RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 SLFNL1Q499Z3 407 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
VPS16-203ENST00000380469 RCOR1Q9UKL0 485 aa19.18■□□□□ 0.66
VPS16-203ENST00000380469 A0A1B0GUL7 405 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 ERVV-2B6SEH9 535 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 PTGS1P23219 599 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 GTF2F1P35269 517 aaKnown RBP eCLIP19.17■□□□□ 0.66
VPS16-203ENST00000380469 ZNF75DP51815 510 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 CCT2P78371 535 aaKnown RBP19.17■□□□□ 0.66
VPS16-203ENST00000380469 LRRC24Q50LG9 513 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 DNAJC25Q9H1X3 360 aa19.17■□□□□ 0.66
VPS16-203ENST00000380469 PCDH11XQ9BZA7 1347 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms