RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 RHOXF2BP0C7M4 288 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 ABCD1P33897 745 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 IQCB1Q15051 598 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 CCDC96Q2M329 555 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 MYSM1Q5VVJ2 828 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 ARMCX5Q6P1M9 558 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 RSRC2Q7L4I2 434 aaKnown RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 RHOXF2Q9BQY4 288 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 KLC4Q9NSK0 619 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 CHCHD3Q9NX63 227 aaKnown RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 MYO6Q9UM54 1294 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 NR1I2O75469 434 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 GJB2P29033 226 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 RANBP1P43487 201 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 ICA1Q05084 483 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 KCNB1Q14721 858 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 RNF187Q5TA31 235 aaPredicted RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 TRIM65Q6PJ69 517 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 SPATA32Q96LK8 384 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 UTP14AQ9BVJ6 771 aaKnown RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 MRFAP1Q9Y605 127 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 SETSIPP0DME0 302 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 CCDC83Q8IWF9 413 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 RGS12O14924 1447 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 RTL1A6NKG5 1358 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 FANCGO15287 622 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 WDHD1O75717 1129 aaPredicted RBP9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 CAVIN2O95810 425 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 CHMP4BP1P59074 171 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 THEMIS2Q5TEJ8 643 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 NUP133Q8WUM0 1156 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 RILPL2Q969X0 211 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 FMNL2Q96PY5 1086 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 L1RE1Q9UN81 338 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 MTMR6Q9Y217 621 aa9.77□□□□□ -0.85
NHLRC3-201ENST00000379599 PPFIA2O75334 1257 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 MPHOSPH8Q99549 860 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 EHD4Q9H223 541 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 DDX20Q9UHI6 824 aaKnown RBP9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 ANAPC4Q9UJX5 808 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 RPGRIP1LQ68CZ1 1315 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 MAFGO15525 162 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 USP4Q13107 963 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 HHATQ5VTY9 493 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 DHX58Q96C10 678 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 WDR24Q96S15 920 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 MRC2Q9UBG0 1479 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 STX1AQ16623 288 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 OSBPL5Q9H0X9 879 aaPredicted RBP9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 KAT14Q9H8E8 782 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 IFNKQ9P0W0 207 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 IMPACTQ9P2X3 320 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 ZNF232Q9UNY5 417 aa9.76□□□□□ -0.85
NHLRC3-201ENST00000379599 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 TSHZ3Q63HK5 1081 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 RSRC1Q96IZ7 334 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 CFAP53Q96M91 514 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 PNKPQ96T60 521 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 DCTPP1Q9H773 170 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 MAGI3Q5TCQ9 1506 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 YEATS2Q9ULM3 1422 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 ZSCAN12O43309 604 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 PDHBP11177 359 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 EIF2S2P20042 333 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 POLD1P28340 1107 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 PRPHP41219 470 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 RAB27AP51159 221 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 IRAK1P51617 712 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 DRAXINQ8NBI3 349 aaPredicted RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 LMBR1Q8WVP7 490 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 XPO4Q9C0E2 1151 aaKnown RBP9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 YIPF3Q9GZM5 350 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 TMEM165Q9HC07 324 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 GRIN2BQ13224 1484 aa9.75□□□□□ -0.85
NHLRC3-201ENST00000379599 ELL2O00472 640 aaPredicted RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 KIF4AO95239 1232 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 MFSD4BQ5TF39 518 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 AMOTL1Q8IY63 956 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 GBP3Q9H0R5 595 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 HMMRO75330 724 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 AK2P54819 239 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 SNCBQ16143 134 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 SLC5A9Q2M3M2 681 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 CCDC40Q4G0X9 1142 aa9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 LARP1BQ659C4 914 aaKnown RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 THUMPD2Q9BTF0 503 aaKnown RBP9.74□□□□□ -0.85
NHLRC3-201ENST00000379599 LRRCC1Q9C099 1032 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms