RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 PDE8BO95263 885 aa29.97■■■□□ 2.39
ECHDC3-201ENST00000379215 CNTROBQ8N137 903 aa29.97■■■□□ 2.39
ECHDC3-201ENST00000379215 NEUROD6Q96NK8 337 aa29.97■■■□□ 2.39
ECHDC3-201ENST00000379215 BSDC1Q9NW68 430 aaPredicted RBP29.97■■■□□ 2.39
ECHDC3-201ENST00000379215 TLR7Q9NYK1 1049 aaKnown RBP29.97■■■□□ 2.39
ECHDC3-201ENST00000379215 TRIM6-TRIM34B2RNG4 842 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 VGLL2Q8N8G2 317 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 UPF2Q9HAU5 1272 aaKnown RBP29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 NRXN2Q9P2S2 1712 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 TNRC6CQ9HCJ0 1690 aaKnown RBP29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 ATP5JP18859 108 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 ATP2B3Q16720 1220 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 CASZ1Q86V15 1759 aa29.96■■■□□ 2.39
ECHDC3-201ENST00000379215 MMP10P09238 476 aa29.95■■■□□ 2.38
ECHDC3-201ENST00000379215 PUM3Q15397 648 aaKnown RBP29.95■■■□□ 2.38
ECHDC3-201ENST00000379215 CRY2Q49AN0 593 aa29.95■■■□□ 2.38
ECHDC3-201ENST00000379215 DBNDD2Q9BQY9 259 aa29.95■■■□□ 2.38
ECHDC3-201ENST00000379215 RPS8P62241 208 aaKnown RBP29.94■■■□□ 2.38
ECHDC3-201ENST00000379215 CCDC24Q8N4L8 307 aa29.94■■■□□ 2.38
ECHDC3-201ENST00000379215 RPGRQ92834 1020 aaKnown RBP29.94■■■□□ 2.38
ECHDC3-201ENST00000379215 TIMM10P62072 90 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 TBC1D9Q6ZT07 1266 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 SLC16A10Q8TF71 515 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 LPIN2Q92539 896 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 RILPL2Q969X0 211 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 BRIP1Q9BX63 1249 aa29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 RBM19Q9Y4C8 960 aaKnown RBP29.93■■■□□ 2.38
ECHDC3-201ENST00000379215 KLRG2A4D1S0 409 aaPredicted RBP29.92■■■□□ 2.38
ECHDC3-201ENST00000379215 CCDC158Q5M9N0 1113 aa29.92■■■□□ 2.38
ECHDC3-201ENST00000379215 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.92■■■□□ 2.38
ECHDC3-201ENST00000379215 GRAPQ13588 217 aa29.91■■■□□ 2.38
ECHDC3-201ENST00000379215 GORABQ5T7V8 394 aa29.91■■■□□ 2.38
ECHDC3-201ENST00000379215 GRAPLQ8TC17 118 aaPredicted RBP29.91■■■□□ 2.38
ECHDC3-201ENST00000379215 EVI5LQ96CN4 794 aa29.91■■■□□ 2.38
ECHDC3-201ENST00000379215 RBM17Q96I25 401 aaKnown RBP29.91■■■□□ 2.38
ECHDC3-201ENST00000379215 SLC5A1P13866 664 aa29.9■■■□□ 2.38
ECHDC3-201ENST00000379215 CELF1Q92879 486 aaKnown RBP29.9■■■□□ 2.38
ECHDC3-201ENST00000379215 XAGE2Q96GT9 111 aa29.9■■■□□ 2.38
ECHDC3-201ENST00000379215 CHRNDQ07001 517 aa29.89■■■□□ 2.38
ECHDC3-201ENST00000379215 ANKRD2Q9GZV1 360 aa29.89■■■□□ 2.37
ECHDC3-201ENST00000379215 IFIT1P09914 478 aaKnown RBP29.88■■■□□ 2.37
ECHDC3-201ENST00000379215 FGFR2P21802 821 aa29.88■■■□□ 2.37
ECHDC3-201ENST00000379215 HOXA10P31260 410 aaPredicted RBP29.88■■■□□ 2.37
ECHDC3-201ENST00000379215 PDE6BP35913 854 aa29.88■■■□□ 2.37
ECHDC3-201ENST00000379215 MSL1Q68DK7 614 aa29.88■■■□□ 2.37
ECHDC3-201ENST00000379215 BOLA2Q9H3K6 86 aa29.87■■■□□ 2.37
ECHDC3-201ENST00000379215 SPEF2Q9C093 1822 aa29.86■■■□□ 2.37
ECHDC3-201ENST00000379215 HAUS7Q99871 368 aa29.86■■■□□ 2.37
ECHDC3-201ENST00000379215 TTC39AQ5SRH9 613 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 TMC4Q7Z404 712 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 TICAM2Q86XR7 235 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 ZNF512BQ96KM6 892 aaPredicted RBP29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 CRAMP1Q96RY5 1269 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 MINPP1Q9UNW1 487 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 HIP1O00291 1037 aa29.85■■■□□ 2.37
ECHDC3-201ENST00000379215 ARAP2Q8WZ64 1704 aa29.84■■■□□ 2.37
ECHDC3-201ENST00000379215 UBE4AQ14139 1066 aa29.84■■■□□ 2.37
ECHDC3-201ENST00000379215 BBOX1O75936 387 aa29.83■■■□□ 2.37
ECHDC3-201ENST00000379215 ADORA1P30542 326 aa29.83■■■□□ 2.37
ECHDC3-201ENST00000379215 HELBQ8NG08 1087 aaPredicted RBP29.83■■■□□ 2.37
ECHDC3-201ENST00000379215 RFX7Q2KHR2 1363 aa29.83■■■□□ 2.37
ECHDC3-201ENST00000379215 MAP4K4O95819 1239 aaPredicted RBP29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 UPF1Q92900 1129 aaKnown RBP eCLIP29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 COL4A1P02462 1669 aa29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 TAF5LO75529 589 aa29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 SEC24BO95487 1268 aa29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 UQCRFS1P1P0C7P4 283 aa29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 CHMLP26374 656 aa29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 MFAP1P55081 439 aaKnown RBP29.82■■■□□ 2.36
ECHDC3-201ENST00000379215 NPR1P16066 1061 aa29.81■■■□□ 2.36
ECHDC3-201ENST00000379215 REC8O95072 547 aa29.8■■■□□ 2.36
ECHDC3-201ENST00000379215 AK9Q5TCS8 1911 aa29.8■■■□□ 2.36
ECHDC3-201ENST00000379215 KCNJ4P48050 445 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 RUFY2Q8WXA3 655 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 DNAJC2Q99543 621 aaKnown RBP29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 FSD1Q9BTV5 496 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 DIAPH3Q9NSV4 1193 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 ANKRD31Q8N7Z5 1873 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 A0A1B0GUL6 1792 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 SRGNP10124 158 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 ALDH1B1P30837 517 aa29.78■■■□□ 2.36
ECHDC3-201ENST00000379215 ARID4AP29374 1257 aaPredicted RBP29.77■■■□□ 2.36
ECHDC3-201ENST00000379215 LRRFIP1Q32MZ4 808 aaKnown RBP29.77■■■□□ 2.36
ECHDC3-201ENST00000379215 CCDC102BQ68D86 513 aa29.77■■■□□ 2.36
ECHDC3-201ENST00000379215 PAG1Q9NWQ8 432 aa29.77■■■□□ 2.36
ECHDC3-201ENST00000379215 MASTLQ96GX5 879 aa29.76■■■□□ 2.35
ECHDC3-201ENST00000379215 ESYT1Q9BSJ8 1104 aa29.76■■■□□ 2.35
ECHDC3-201ENST00000379215 TAF1P21675 1872 aa29.76■■■□□ 2.35
ECHDC3-201ENST00000379215 ANP32AP39687 249 aaKnown RBP29.75■■■□□ 2.35
ECHDC3-201ENST00000379215 LEMD3Q9Y2U8 911 aa29.75■■■□□ 2.35
ECHDC3-201ENST00000379215 XDHP47989 1333 aa29.75■■■□□ 2.35
ECHDC3-201ENST00000379215 KBTBD3Q8NAB2 608 aa29.74■■■□□ 2.35
ECHDC3-201ENST00000379215 TBC1D32Q96NH3 1257 aa29.74■■■□□ 2.35
ECHDC3-201ENST00000379215 GNL3LQ9NVN8 582 aaKnown RBP29.74■■■□□ 2.35
ECHDC3-201ENST00000379215 CAVIN4Q5BKX8 364 aa29.74■■■□□ 2.35
ECHDC3-201ENST00000379215 EPB41L2O43491 1005 aaKnown RBP29.73■■■□□ 2.35
ECHDC3-201ENST00000379215 C22orf23Q9BZE7 217 aa29.73■■■□□ 2.35
ECHDC3-201ENST00000379215 RAD50Q92878 1312 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 H0YIN7 160 aa29.72■■■□□ 2.35
ECHDC3-201ENST00000379215 GOLIM4O00461 696 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 408 ms