RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 TAOK3Q9H2K8 898 aa14.88□□□□□ -0.03
PCNA-201ENST00000379143 SUPT16HQ9Y5B9 1047 aaKnown RBP14.88□□□□□ -0.03
PCNA-201ENST00000379143 COL4A1P02462 1669 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 SNED1Q8TER0 1413 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 NFKBIEO00221 500 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 KIF3CO14782 793 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
PCNA-201ENST00000379143 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 SUPT20HQ8NEM7 779 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 ZBTB40Q9NUA8 1239 aa14.87□□□□□ -0.03
PCNA-201ENST00000379143 SPEF2Q9C093 1822 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 OLFM4Q6UX06 510 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 RTFDC1Q9BY42 306 aaPredicted RBP14.86□□□□□ -0.03
PCNA-201ENST00000379143 ANKRD2Q9GZV1 360 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 VPS33BQ9H267 617 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 CNNM1Q9NRU3 951 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 PODXL2Q9NZ53 605 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 FBXO3Q9UK99 471 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 MINPP1Q9UNW1 487 aa14.86□□□□□ -0.03
PCNA-201ENST00000379143 NSFL1CQ9UNZ2 370 aaKnown RBP14.86□□□□□ -0.03
PCNA-201ENST00000379143 XDHP47989 1333 aa14.85□□□□□ -0.03
PCNA-201ENST00000379143 LMNB1P20700 586 aa14.85□□□□□ -0.03
PCNA-201ENST00000379143 ANKIB1Q9P2G1 1089 aa14.85□□□□□ -0.03
PCNA-201ENST00000379143 CENPBP07199 599 aaPredicted RBP14.84□□□□□ -0.03
PCNA-201ENST00000379143 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
PCNA-201ENST00000379143 GPSM2P81274 684 aa14.84□□□□□ -0.03
PCNA-201ENST00000379143 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
PCNA-201ENST00000379143 MROH5Q6ZUA9 1318 aa14.83□□□□□ -0.03
PCNA-201ENST00000379143 LTBP1Q14766 1721 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 WDR90Q96KV7 1748 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 ATP8B2P98198 1209 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 RASSF7Q02833 373 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 PTPN12Q05209 780 aaKnown RBP14.83□□□□□ -0.04
PCNA-201ENST00000379143 AAMPQ13685 434 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
PCNA-201ENST00000379143 EYA3Q99504 573 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 C1orf115Q9H7X2 142 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 COPRSQ9NQ92 184 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 GGA1Q9UJY5 639 aa14.83□□□□□ -0.04
PCNA-201ENST00000379143 SBF1O95248 1867 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 C6orf229H3BNL8 230 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 CIAO1O76071 339 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
PCNA-201ENST00000379143 CHRNDQ07001 517 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 CEP85Q6P2H3 762 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 LEMD3Q9Y2U8 911 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 RIPOR2Q9Y4F9 1068 aa14.82□□□□□ -0.04
PCNA-201ENST00000379143 PNMA6EA0A0J9YXQ4 647 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 EYA2O00167 538 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 POLA2Q14181 598 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 WASHC4Q2M389 1173 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 C9orf131Q5VYM1 1079 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 SLC51AQ86UW1 340 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 TBC1D16Q8TBP0 767 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 SSH3Q8TE77 659 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 ZNF277Q9NRM2 450 aaPredicted RBP14.81□□□□□ -0.04
PCNA-201ENST00000379143 RNF181Q9P0P0 153 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 DUOX1Q9NRD9 1551 aa14.81□□□□□ -0.04
PCNA-201ENST00000379143 ZC3H4Q9UPT8 1303 aaKnown RBP14.81□□□□□ -0.04
PCNA-201ENST00000379143 HMMRO75330 724 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 UFL1O94874 794 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 IL15P40933 162 aaPredicted RBP14.8□□□□□ -0.04
PCNA-201ENST00000379143 KCNJ4P48050 445 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 APLP1P51693 650 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 DNAJC5GQ8N7S2 189 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
PCNA-201ENST00000379143 ZC3H12CQ9C0D7 883 aaKnown RBP14.8□□□□□ -0.04
PCNA-201ENST00000379143 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
PCNA-201ENST00000379143 DICER1Q9UPY3 1922 aaKnown RBP14.8□□□□□ -0.04
PCNA-201ENST00000379143 CCDC88AQ3V6T2 1871 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 A0A1B0GUL6 1792 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 PPIP5K2O43314 1243 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 KIAA2012Q0VF49 1180 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 LRRC24Q50LG9 513 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 METTL24Q5JXM2 366 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 LARGE2Q8N3Y3 721 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 JDP2Q8WYK2 163 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 SIL1Q9H173 461 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 ZNF804BA4D1E1 1349 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 PCNTO95613 3336 aa14.79□□□□□ -0.04
PCNA-201ENST00000379143 PDE8BO95263 885 aa14.78□□□□□ -0.04
PCNA-201ENST00000379143 PRELPP51888 382 aa14.78□□□□□ -0.04
PCNA-201ENST00000379143 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.043e-7■■■□□ 17.8
PCNA-201ENST00000379143 AOC3Q16853 763 aa14.78□□□□□ -0.04
PCNA-201ENST00000379143 PA2G4Q9UQ80 394 aaKnown RBP14.78□□□□□ -0.04
PCNA-201ENST00000379143 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
PCNA-201ENST00000379143 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 TAF5LO75529 589 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 TOMM70O94826 608 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 UBE4AQ14139 1066 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 NIM1KQ8IY84 436 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.04
PCNA-201ENST00000379143 CEP126Q9P2H0 1117 aa14.77□□□□□ -0.04
PCNA-201ENST00000379143 G3V3G9 751 aa14.76□□□□□ -0.05
PCNA-201ENST00000379143 SURF6O75683 361 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms