RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GIGYF2Q6Y7W6 1299 aaKnown RBP5.65□□□□□ -1.51
PCDH9-201ENST00000377861 RUFY4Q6ZNE9 571 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 NOL8Q76FK4 1167 aaKnown RBP5.65□□□□□ -1.51
PCDH9-201ENST00000377861 SPECC1LQ69YQ0 1117 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 PHACTR1Q9C0D0 580 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 FAM135BQ49AJ0 1406 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 GCOM1H8Y6P7 765 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-201ENST00000377861 MYZAPP0CAP1 466 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 EFCC1Q9HA90 598 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 NFXL1Q6ZNB6 911 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 IFNL2Q8IZJ0 200 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 RUNDC3BQ96NL0 473 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 BAG3O95817 575 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 SELENOOQ9BVL4 669 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 SUDS3Q9H7L9 328 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-201ENST00000377861 ADGRL3Q9HAR2 1447 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 KIF4AO95239 1232 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 MAP3K5Q99683 1374 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 CDC37Q16543 378 aaPredicted RBP5.65□□□□□ -1.51
PCDH9-201ENST00000377861 RABGGTAQ92696 567 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 C19orf44Q9H6X5 657 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 TCEAL9Q9UHQ7 104 aa5.65□□□□□ -1.51
PCDH9-201ENST00000377861 IFIT1P09914 478 aaKnown RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC38Q502W7 563 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ESR2Q92731 530 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ABCC4O15439 1325 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC69A6NI79 296 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 EBAG9O00559 213 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 PSMA7O14818 248 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 GRM8O00222 908 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 MSH5O43196 834 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CARD14Q9BXL6 1004 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ALS2CLQ60I27 953 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 KIF6Q6ZMV9 814 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 HOMER3Q9NSC5 361 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 PTPRKQ15262 1439 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 TNNT1P13805 278 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 AIMP1Q12904 312 aaKnown RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ANKRD27Q96NW4 1050 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CABP2Q9NPB3 220 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ABCC12Q96J65 1359 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 EVI5O60447 810 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 SGSM2O43147 1006 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CEP85Q6P2H3 762 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 POTEDQ86YR6 584 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 MRPS27Q92552 414 aaKnown RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 SMARCC1Q92922 1105 aaPredicted RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 PPCSQ9HAB8 311 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 BTBD11A6QL63 1104 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 GRIPAP1Q4V328 841 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 RCSD1Q6JBY9 416 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 IFIT5Q13325 482 aaKnown RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 RASSF8Q8NHQ8 419 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 SNW1Q13573 536 aaKnown RBP5.64□□□□□ -1.51
PCDH9-201ENST00000377861 WHAMMP3Q1A5X7 153 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 GDAP1L1Q96MZ0 367 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CEP83Q9Y592 693 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 TAF4BQ92750 862 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 APPP05067 770 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ERVV-2B6SEH9 535 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 LMOD2Q6P5Q4 547 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 CSB-PGBD3P0DP91 1061 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 ARHGEF11O15085 1522 aa5.64□□□□□ -1.51
PCDH9-201ENST00000377861 H0YHG0 523 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 KIF5AQ12840 1032 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC102AQ96A19 550 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 AK8Q96MA6 479 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 SLC26A8Q96RN1 970 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 NUTM2FA1L443 756 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 BUB1BO60566 1050 aaPredicted RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 FOXR2Q6PJQ5 311 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 MAIP1Q8WWC4 291 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC151A5D8V7 595 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 MYL5Q02045 173 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 EXOC8Q8IYI6 725 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 EHMT1Q9H9B1 1298 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 RFX7Q2KHR2 1363 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 CUTAO60888 179 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 CCDC91Q7Z6B0 441 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 FAM89AQ96GI7 184 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 SLC12A7Q9Y666 1083 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 EVA1CP58658 441 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 SYT1P21579 422 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 MBIPQ9NS73 344 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 B4DLN1 442 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 MRPL12P52815 198 aaKnown RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 PDE4BQ07343 736 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 ARL6IP4Q66PJ3 421 aaKnown RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 PLEKHF1Q96S99 279 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 PTPN23Q9H3S7 1636 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 FLT4P35916 1363 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 A0A1B0GVL5 298 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 IARSP41252 1262 aaKnown RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 ACTN4O43707 911 aaKnown RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 SSRP1Q08945 709 aaKnown RBP5.63□□□□□ -1.51
PCDH9-201ENST00000377861 NCAPGQ9BPX3 1015 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 FERMT1Q9BQL6 677 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 PPP6R2O75170 966 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 SYKP43405 635 aa5.63□□□□□ -1.51
PCDH9-201ENST00000377861 CTAGE15A4D2H0 777 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms