RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
HLA-A-201ENST00000376802 EGFRP00533 1210 aa22.55■■□□□ 1.2
HLA-A-201ENST00000376802 CDC37L1Q7L3B6 337 aa22.55■■□□□ 1.2
HLA-A-201ENST00000376802 PODXL2Q9NZ53 605 aa22.55■■□□□ 1.2
HLA-A-201ENST00000376802 AOC2O75106 756 aa22.54■■□□□ 1.2
HLA-A-201ENST00000376802 CCDC30Q5VVM6 783 aa22.54■■□□□ 1.2
HLA-A-201ENST00000376802 DLK2Q6UY11 383 aa22.54■■□□□ 1.2
HLA-A-201ENST00000376802 HHIPL1Q96JK4 782 aa22.54■■□□□ 1.2
HLA-A-201ENST00000376802 EYA3Q99504 573 aa22.54■■□□□ 1.2
HLA-A-201ENST00000376802 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
HLA-A-201ENST00000376802 PDE8AO60658 829 aa22.53■■□□□ 1.2
HLA-A-201ENST00000376802 PSME4Q14997 1843 aa22.52■■□□□ 1.2
HLA-A-201ENST00000376802 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
HLA-A-201ENST00000376802 RPS12P25398 132 aaKnown RBP22.52■■□□□ 1.2
HLA-A-201ENST00000376802 MAP2K2P36507 400 aa22.52■■□□□ 1.2
HLA-A-201ENST00000376802 TBC1D10BQ4KMP7 808 aaPredicted RBP22.52■■□□□ 1.2
HLA-A-201ENST00000376802 USP48Q86UV5 1035 aa22.52■■□□□ 1.2
HLA-A-201ENST00000376802 MYH3P11055 1940 aa22.51■■□□□ 1.19
HLA-A-201ENST00000376802 CCDC152Q4G0S7 254 aa22.51■■□□□ 1.19
HLA-A-201ENST00000376802 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
HLA-A-201ENST00000376802 ZC3H12CQ9C0D7 883 aaKnown RBP22.51■■□□□ 1.19
HLA-A-201ENST00000376802 ZNF408Q9H9D4 720 aa22.51■■□□□ 1.19
HLA-A-201ENST00000376802 ANKIB1Q9P2G1 1089 aa22.51■■□□□ 1.19
HLA-A-201ENST00000376802 MAP3K2Q9Y2U5 619 aa22.51■■□□□ 1.19
HLA-A-201ENST00000376802 DDX58O95786 925 aaKnown RBP22.5■■□□□ 1.19
HLA-A-201ENST00000376802 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
HLA-A-201ENST00000376802 VIL1P09327 827 aaKnown RBP22.5■■□□□ 1.19
HLA-A-201ENST00000376802 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
HLA-A-201ENST00000376802 CCDC85AQ96PX6 553 aaPredicted RBP22.5■■□□□ 1.19
HLA-A-201ENST00000376802 PI4KAP2A4QPH2 592 aa22.49■■□□□ 1.19
HLA-A-201ENST00000376802 UFL1O94874 794 aa22.49■■□□□ 1.19
HLA-A-201ENST00000376802 PI4KAP1Q8N8J0 262 aa22.49■■□□□ 1.19
HLA-A-201ENST00000376802 CHMP4AQ9BY43 222 aa22.49■■□□□ 1.19
HLA-A-201ENST00000376802 SPEF2Q9C093 1822 aa22.48■■□□□ 1.19
HLA-A-201ENST00000376802 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
HLA-A-201ENST00000376802 BEGAINQ9BUH8 593 aa22.48■■□□□ 1.19
HLA-A-201ENST00000376802 GGA1Q9UJY5 639 aa22.48■■□□□ 1.19
HLA-A-201ENST00000376802 RBM26Q5T8P6 1007 aaKnown RBP22.47■■□□□ 1.19
HLA-A-201ENST00000376802 KRT26Q7Z3Y9 468 aa22.47■■□□□ 1.19
HLA-A-201ENST00000376802 WWC1Q8IX03 1113 aa22.47■■□□□ 1.19
HLA-A-201ENST00000376802 WTIPA6NIX2 430 aaPredicted RBP22.46■■□□□ 1.19
HLA-A-201ENST00000376802 TSKSQ9UJT2 592 aa22.46■■□□□ 1.19
HLA-A-201ENST00000376802 ADM5C9JUS6 153 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 CTSWP56202 376 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 KIF4BQ2VIQ3 1234 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 G2E3Q7L622 706 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 ANKRD18AQ8IVF6 992 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 TTLL11Q8NHH1 800 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 ZIC5Q96T25 663 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 ZNF609O15014 1411 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 ASTN2O75129 1339 aaPredicted RBP22.45■■□□□ 1.18
HLA-A-201ENST00000376802 XDHP47989 1333 aa22.45■■□□□ 1.18
HLA-A-201ENST00000376802 CASP8AP2Q9UKL3 1982 aa22.44■■□□□ 1.18
HLA-A-201ENST00000376802 BRPF1P55201 1214 aaPredicted RBP22.44■■□□□ 1.18
HLA-A-201ENST00000376802 CWF19L2Q2TBE0 894 aaKnown RBP22.44■■□□□ 1.18
HLA-A-201ENST00000376802 DCPSQ96C86 337 aaKnown RBP22.44■■□□□ 1.18
HLA-A-201ENST00000376802 ABHD8Q96I13 439 aa22.44■■□□□ 1.18
HLA-A-201ENST00000376802 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
HLA-A-201ENST00000376802 G3V3G9 751 aa22.43■■□□□ 1.18
HLA-A-201ENST00000376802 HUNKP57058 714 aa22.43■■□□□ 1.18
HLA-A-201ENST00000376802 TWISTNBQ3B726 338 aaPredicted RBP22.43■■□□□ 1.18
HLA-A-201ENST00000376802 DCAF8Q5TAQ9 597 aa22.43■■□□□ 1.18
HLA-A-201ENST00000376802 GMLQ99445 158 aa22.43■■□□□ 1.18
HLA-A-201ENST00000376802 NEURL1BA8MQ27 555 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 ATP2B4P23634 1241 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 ZNF280AP59817 542 aaPredicted RBP22.42■■□□□ 1.18
HLA-A-201ENST00000376802 RSBN1LQ6PCB5 846 aaPredicted RBP22.42■■□□□ 1.18
HLA-A-201ENST00000376802 AGBL3Q8NEM8 1001 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 GREM2Q9H772 168 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
HLA-A-201ENST00000376802 FAM155AB1AL88 458 aaPredicted RBP22.41■■□□□ 1.18
HLA-A-201ENST00000376802 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
HLA-A-201ENST00000376802 NOGQ13253 232 aa22.41■■□□□ 1.18
HLA-A-201ENST00000376802 CDC5LQ99459 802 aaKnown RBP22.41■■□□□ 1.18
HLA-A-201ENST00000376802 GBA2Q9HCG7 927 aaPredicted RBP22.41■■□□□ 1.18
HLA-A-201ENST00000376802 BSDC1Q9NW68 430 aaPredicted RBP22.41■■□□□ 1.18
HLA-A-201ENST00000376802 GGA3Q9NZ52 723 aa22.41■■□□□ 1.18
HLA-A-201ENST00000376802 MINPP1Q9UNW1 487 aa22.41■■□□□ 1.18
HLA-A-201ENST00000376802 IL16Q14005 1332 aa22.41■■□□□ 1.18
HLA-A-201ENST00000376802 H7C1W4 665 aa22.4■■□□□ 1.18
HLA-A-201ENST00000376802 CA12O43570 354 aa22.4■■□□□ 1.18
HLA-A-201ENST00000376802 NEXNQ0ZGT2 675 aa22.4■■□□□ 1.18
HLA-A-201ENST00000376802 PODNQ7Z5L7 613 aa22.39■■□□□ 1.18
HLA-A-201ENST00000376802 USP17L3A6NCW0 530 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 USP17L4A6NCW7 530 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 SCARF1Q14162 830 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
HLA-A-201ENST00000376802 RGMBQ6NW40 437 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 USP17L1Q7RTZ2 530 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 UBE3BQ7Z3V4 1068 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 C2orf69Q8N8R5 385 aa22.38■■□□□ 1.17
HLA-A-201ENST00000376802 USP17L8P0C7I0 530 aa22.37■■□□□ 1.17
HLA-A-201ENST00000376802 GCKRQ14397 625 aa22.37■■□□□ 1.17
HLA-A-201ENST00000376802 ANGEL2Q5VTE6 544 aaKnown RBP22.37■■□□□ 1.17
HLA-A-201ENST00000376802 SULF1Q8IWU6 871 aa22.37■■□□□ 1.17
HLA-A-201ENST00000376802 MED23Q9ULK4 1368 aa22.37■■□□□ 1.17
HLA-A-201ENST00000376802 CCT4P50991 539 aaKnown RBP22.36■■□□□ 1.17
HLA-A-201ENST00000376802 CASP7P55210 303 aa22.36■■□□□ 1.17
HLA-A-201ENST00000376802 FLIIQ13045 1269 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms