RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
SSH3-203ENST00000376757 AOPEPQ8N6M6 819 aa18.55■□□□□ 0.56
SSH3-203ENST00000376757 ZNF215Q9UL58 517 aaPredicted RBP18.55■□□□□ 0.56
SSH3-203ENST00000376757 A0A1B0GVL5 298 aa18.55■□□□□ 0.56
SSH3-203ENST00000376757 GOLIM4O00461 696 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 ZNF771Q7L3S4 317 aaPredicted RBP18.54■□□□□ 0.56
SSH3-203ENST00000376757 MED23Q9ULK4 1368 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 UBR1Q8IWV7 1749 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 HIP1O00291 1037 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
SSH3-203ENST00000376757 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 ZBTB9Q96C00 473 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 CCDC69A6NI79 296 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 HAND2P61296 217 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 TIMM10P62072 90 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 PDIA6Q15084 440 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 TTLL5Q6EMB2 1281 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 ST7Q9NRC1 585 aa18.54■□□□□ 0.56
SSH3-203ENST00000376757 NEURL1BA8MQ27 555 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 IQCB1Q15051 598 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 FSIP1Q8NA03 581 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 ANKRD24Q8TF21 1146 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 ORAI2Q96SN7 254 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 SMTNL1A8MU46 457 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 NEXNQ0ZGT2 675 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
SSH3-203ENST00000376757 ZNF609O15014 1411 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 CTDNEP1O95476 244 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 DDX58O95786 925 aaKnown RBP18.52■□□□□ 0.56
SSH3-203ENST00000376757 GCKRQ14397 625 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 TNNI3KQ59H18 835 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.56
SSH3-203ENST00000376757 FPGT-TNNI3KV9GXZ4 949 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 HOXB7P09629 217 aa18.52■□□□□ 0.56
SSH3-203ENST00000376757 KINO60870 393 aaKnown RBP18.51■□□□□ 0.55
SSH3-203ENST00000376757 ELF2Q15723 593 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 SDF4Q9BRK5 362 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 RGPD2P0DJD1 1756 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 GORABQ5T7V8 394 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 DDX21Q9NR30 783 aaKnown RBP eCLIP18.51■□□□□ 0.55
SSH3-203ENST00000376757 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
SSH3-203ENST00000376757 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 LRRN4CLQ8ND94 238 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 NSUN7Q8NE18 718 aaKnown RBP18.51■□□□□ 0.55
SSH3-203ENST00000376757 SNRKQ9NRH2 765 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 CTNNA3Q9UI47 895 aa18.51■□□□□ 0.55
SSH3-203ENST00000376757 PTPN12Q05209 780 aaKnown RBP18.5■□□□□ 0.55
SSH3-203ENST00000376757 GCP02774 474 aa18.5■□□□□ 0.55
SSH3-203ENST00000376757 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
SSH3-203ENST00000376757 CFAP45Q9UL16 551 aa18.5■□□□□ 0.55
SSH3-203ENST00000376757 SMC2O95347 1197 aa18.49■□□□□ 0.55
SSH3-203ENST00000376757 RBM43Q6ZSC3 357 aaKnown RBP18.49■□□□□ 0.55
SSH3-203ENST00000376757 ZNF594Q96JF6 807 aaPredicted RBP18.49■□□□□ 0.55
SSH3-203ENST00000376757 A0A087WZG4 1122 aa18.49■□□□□ 0.55
SSH3-203ENST00000376757 SNW1Q13573 536 aaKnown RBP18.49■□□□□ 0.55
SSH3-203ENST00000376757 HSP90AA4PQ58FG1 418 aa18.49■□□□□ 0.55
SSH3-203ENST00000376757 DHX40Q8IX18 779 aaKnown RBP18.49■□□□□ 0.55
SSH3-203ENST00000376757 HMG20BQ9P0W2 317 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 GOLGA8FQ08AF8 430 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 GOLGA8DPQ0D2H9 430 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 STX1AQ16623 288 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 KMT5BQ4FZB7 885 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 MCMDC2Q4G0Z9 681 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 LMBR1LQ6UX01 489 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 STK11IPQ8N1F8 1099 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 DPCR1Q3MIW9 517 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 ZNF790Q6PG37 636 aa18.48■□□□□ 0.55
SSH3-203ENST00000376757 UTP14CQ5TAP6 766 aaKnown RBP18.47■□□□□ 0.55
SSH3-203ENST00000376757 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
SSH3-203ENST00000376757 ERICH4A6NGS2 130 aa18.47■□□□□ 0.55
SSH3-203ENST00000376757 ANKRD13DQ6ZTN6 518 aa18.47■□□□□ 0.55
SSH3-203ENST00000376757 TMX1Q9H3N1 280 aa18.47■□□□□ 0.55
SSH3-203ENST00000376757 CGNQ9P2M7 1197 aaKnown RBP18.47■□□□□ 0.55
SSH3-203ENST00000376757 NDUFA8P51970 172 aa18.46■□□□□ 0.55
SSH3-203ENST00000376757 SF3A1Q15459 793 aaKnown RBP18.46■□□□□ 0.55
SSH3-203ENST00000376757 ZNF330Q9Y3S2 320 aaPredicted RBP18.46■□□□□ 0.55
SSH3-203ENST00000376757 CCZ1BP86790 482 aa18.46■□□□□ 0.55
SSH3-203ENST00000376757 CCZ1P86791 482 aaPredicted RBP18.46■□□□□ 0.55
SSH3-203ENST00000376757 TMC6Q7Z403 805 aa18.46■□□□□ 0.55
SSH3-203ENST00000376757 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
SSH3-203ENST00000376757 ATP5JP18859 108 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 KRT32Q14532 448 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 FBXO38Q6PIJ6 1188 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
SSH3-203ENST00000376757 PCDHA7Q9UN72 937 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 CRYBG1Q9Y4K1 1723 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 ZBTB22O15209 634 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
SSH3-203ENST00000376757 GTPBP4Q9BZE4 634 aaKnown RBP18.45■□□□□ 0.54
SSH3-203ENST00000376757 IFNKQ9P0W0 207 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
SSH3-203ENST00000376757 RXRAP19793 462 aa18.45■□□□□ 0.54
SSH3-203ENST00000376757 FAM177A1Q8N128 213 aaPredicted RBP18.45■□□□□ 0.54
SSH3-203ENST00000376757 LMOD1P29536 600 aaPredicted RBP18.44■□□□□ 0.54
SSH3-203ENST00000376757 MARCKSP29966 332 aaPredicted RBP18.44■□□□□ 0.54
SSH3-203ENST00000376757 USPL1Q5W0Q7 1092 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms