RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TRAF5O00463 557 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 PSMD14O00487 310 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 CA12O43570 354 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 UFL1O94874 794 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 CST9Q5W186 159 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 XDHP47989 1333 aa18.92■□□□□ 0.62
HDAC6-204ENST00000376643 CAPN15O75808 1086 aa18.91■□□□□ 0.62
HDAC6-204ENST00000376643 SAPCD2Q86UD0 394 aa18.91■□□□□ 0.62
HDAC6-204ENST00000376643 WWC1Q8IX03 1113 aa18.91■□□□□ 0.62
HDAC6-204ENST00000376643 GPR101Q96P66 508 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-204ENST00000376643 PI4KAP2A4QPH2 592 aa18.9■□□□□ 0.62
HDAC6-204ENST00000376643 ANP32CO43423 234 aa18.9■□□□□ 0.62
HDAC6-204ENST00000376643 ATP2B4P23634 1241 aa18.9■□□□□ 0.62
HDAC6-204ENST00000376643 TWISTNBQ3B726 338 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-204ENST00000376643 PI4KAP1Q8N8J0 262 aa18.9■□□□□ 0.62
HDAC6-204ENST00000376643 TRPM4Q8TD43 1214 aa18.9■□□□□ 0.62
HDAC6-204ENST00000376643 DCPSQ96C86 337 aaKnown RBP18.9■□□□□ 0.62
HDAC6-204ENST00000376643 GLIS2Q9BZE0 524 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-204ENST00000376643 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.62
HDAC6-204ENST00000376643 CTSWP56202 376 aa18.89■□□□□ 0.61
HDAC6-204ENST00000376643 SEC31BQ9NQW1 1179 aa18.89■□□□□ 0.61
HDAC6-204ENST00000376643 TAF1P21675 1872 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 VIL1P09327 827 aaKnown RBP18.88■□□□□ 0.61
HDAC6-204ENST00000376643 LBX1P52954 281 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 HIRAP54198 1017 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-204ENST00000376643 GRM1Q13255 1194 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 DOK7Q18PE1 504 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 CYP4F22Q6NT55 531 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 TSPYL6Q8N831 410 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 AGBL3Q8NEM8 1001 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 TSR2Q969E8 191 aaKnown RBP18.88■□□□□ 0.61
HDAC6-204ENST00000376643 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 ZNF408Q9H9D4 720 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 MRS2Q9HD23 443 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 ZBTB12Q9Y330 459 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-204ENST00000376643 RTL9Q8NET4 1388 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 ZNF609O15014 1411 aa18.88■□□□□ 0.61
HDAC6-204ENST00000376643 HSPA8P11142 646 aaKnown RBP18.87■□□□□ 0.61
HDAC6-204ENST00000376643 KRT26Q7Z3Y9 468 aa18.87■□□□□ 0.61
HDAC6-204ENST00000376643 PODNQ7Z5L7 613 aa18.87■□□□□ 0.61
HDAC6-204ENST00000376643 SLC4A2P04920 1241 aa18.86■□□□□ 0.61
HDAC6-204ENST00000376643 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
HDAC6-204ENST00000376643 NOGQ13253 232 aa18.86■□□□□ 0.61
HDAC6-204ENST00000376643 KIF4BQ2VIQ3 1234 aa18.86■□□□□ 0.61
HDAC6-204ENST00000376643 WDR63Q8IWG1 891 aa18.86■□□□□ 0.61
HDAC6-204ENST00000376643 SULF1Q8IWU6 871 aa18.86■□□□□ 0.61
HDAC6-204ENST00000376643 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
HDAC6-204ENST00000376643 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
HDAC6-204ENST00000376643 IGHMBP2P38935 993 aaKnown RBP18.85■□□□□ 0.61
HDAC6-204ENST00000376643 MMP14P50281 582 aa18.85■□□□□ 0.61
HDAC6-204ENST00000376643 BRPF1P55201 1214 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-204ENST00000376643 TBC1D10BQ4KMP7 808 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-204ENST00000376643 SAMD7Q7Z3H4 446 aa18.85■□□□□ 0.61
HDAC6-204ENST00000376643 MED23Q9ULK4 1368 aa18.84■□□□□ 0.61
HDAC6-204ENST00000376643 IGKV5-2P06315 115 aa18.84■□□□□ 0.61
HDAC6-204ENST00000376643 RSBN1LQ6PCB5 846 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-204ENST00000376643 USP48Q86UV5 1035 aa18.84■□□□□ 0.61
HDAC6-204ENST00000376643 C2orf69Q8N8R5 385 aa18.84■□□□□ 0.61
HDAC6-204ENST00000376643 TTLL11Q8NHH1 800 aa18.84■□□□□ 0.61
HDAC6-204ENST00000376643 CCDC85AQ96PX6 553 aaPredicted RBP18.84■□□□□ 0.61
HDAC6-204ENST00000376643 MYO3BQ8WXR4 1341 aa18.83■□□□□ 0.61
HDAC6-204ENST00000376643 USP17L3A6NCW0 530 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 USP17L4A6NCW7 530 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 HUNKP57058 714 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 FLIIQ13045 1269 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 FKBP5Q13451 457 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-204ENST00000376643 USP17L1Q7RTZ2 530 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 PLA2G12BQ9BX93 195 aa18.83■□□□□ 0.6
HDAC6-204ENST00000376643 ZNF280AP59817 542 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-204ENST00000376643 RBM26Q5T8P6 1007 aaKnown RBP18.82■□□□□ 0.6
HDAC6-204ENST00000376643 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
HDAC6-204ENST00000376643 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
HDAC6-204ENST00000376643 CCDC102AQ96A19 550 aa18.82■□□□□ 0.6
HDAC6-204ENST00000376643 ANKRD2Q9GZV1 360 aa18.82■□□□□ 0.6
HDAC6-204ENST00000376643 GBA2Q9HCG7 927 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-204ENST00000376643 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
HDAC6-204ENST00000376643 FANCIQ9NVI1 1328 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 SHTN1A0MZ66 631 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 H7C1W4 665 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 USP17L8P0C7I0 530 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 GCKRQ14397 625 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 CWF19L2Q2TBE0 894 aaKnown RBP18.81■□□□□ 0.6
HDAC6-204ENST00000376643 UBE3BQ7Z3V4 1068 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 JARID2Q92833 1246 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-204ENST00000376643 MPHOSPH8Q99549 860 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 GREM2Q9H772 168 aa18.81■□□□□ 0.6
HDAC6-204ENST00000376643 PITPNM2Q9BZ72 1349 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 RGMBQ6NW40 437 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 OGFOD1Q8N543 542 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 COA1Q9GZY4 146 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 GGA3Q9NZ52 723 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 MINPP1Q9UNW1 487 aa18.8■□□□□ 0.6
HDAC6-204ENST00000376643 COL4A1P02462 1669 aa18.79■□□□□ 0.6
HDAC6-204ENST00000376643 MYH3P11055 1940 aa18.79■□□□□ 0.6
HDAC6-204ENST00000376643 ZNF316A6NFI3 1004 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-204ENST00000376643 CCT4P50991 539 aaKnown RBP18.79■□□□□ 0.6
HDAC6-204ENST00000376643 FKBP1BP68106 108 aa18.79■□□□□ 0.6
HDAC6-204ENST00000376643 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
HDAC6-204ENST00000376643 KCNQ5Q9NR82 932 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms