RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
HMGCL-202ENST00000374487 TTLL7Q6ZT98 887 aa14.54□□□□□ -0.08
HMGCL-202ENST00000374487 CCDC24Q8N4L8 307 aa14.54□□□□□ -0.08
HMGCL-202ENST00000374487 ISY1Q9ULR0 285 aaKnown RBP14.54□□□□□ -0.08
HMGCL-202ENST00000374487 CHMP3Q9Y3E7 222 aa14.54□□□□□ -0.08
HMGCL-202ENST00000374487 CAMTA2O94983 1202 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 HMGB2P26583 209 aaKnown RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 KCNJ4P48050 445 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 MRE11P49959 708 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 PTPN12Q05209 780 aaKnown RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 KLHL40Q2TBA0 621 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 DZIP3Q86Y13 1208 aaKnown RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 FSD1Q9BTV5 496 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 COL24A1Q17RW2 1714 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 PTH1RQ03431 593 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 TFCP2Q12800 502 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 NFIXQ14938 502 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 HLFQ16534 295 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 FOXD4L5Q5VV16 416 aaPredicted RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 TBC1D9BQ66K14 1250 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 NLGN1Q8N2Q7 840 aa14.53□□□□□ -0.08
HMGCL-202ENST00000374487 FOXD4L4Q8WXT5 416 aaPredicted RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 CWC25Q9NXE8 425 aaPredicted RBP14.53□□□□□ -0.08
HMGCL-202ENST00000374487 NCLP19338 710 aaKnown RBP14.52□□□□□ -0.08
HMGCL-202ENST00000374487 RFX5P48382 616 aaPredicted RBP14.52□□□□□ -0.08
HMGCL-202ENST00000374487 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.08
HMGCL-202ENST00000374487 ZKSCAN1P17029 563 aaPredicted RBP14.51□□□□□ -0.09
HMGCL-202ENST00000374487 CASTP20810 708 aaKnown RBP14.51□□□□□ -0.09
HMGCL-202ENST00000374487 TM4SF1P30408 202 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 NMIQ13287 307 aaPredicted RBP14.51□□□□□ -0.09
HMGCL-202ENST00000374487 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 PRPF40BQ6NWY9 871 aaKnown RBP14.51□□□□□ -0.09
HMGCL-202ENST00000374487 FAM227BQ96M60 508 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 ZBTB3Q9H5J0 574 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 H7C1W4 665 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 PRPF40AO75400 957 aaKnown RBP14.51□□□□□ -0.09
HMGCL-202ENST00000374487 LAMB4A4D0S4 1761 aa14.51□□□□□ -0.09
HMGCL-202ENST00000374487 AK2P54819 239 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 CASP7P55210 303 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 GRPEL1Q9HAV7 217 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 LMBRD1Q9NUN5 540 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 LIMCH1Q9UPQ0 1083 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 CCDC171Q6TFL3 1326 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 POLRMTO00411 1230 aaKnown RBP14.5□□□□□ -0.09
HMGCL-202ENST00000374487 ATP5JP18859 108 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 JAKMIP1Q96N16 626 aaKnown RBP14.5□□□□□ -0.09
HMGCL-202ENST00000374487 TTC14Q96N46 770 aa14.5□□□□□ -0.09
HMGCL-202ENST00000374487 DBNLQ9UJU6 430 aaKnown RBP14.5□□□□□ -0.09
HMGCL-202ENST00000374487 BRD1O95696 1058 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 FOXO4P98177 505 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 CCDC191Q8NCU4 936 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 CYP46A1Q9Y6A2 500 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 FAM177BA6PVY3 158 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 RBM8AQ9Y5S9 174 aaKnown RBP14.49□□□□□ -0.09
HMGCL-202ENST00000374487 PARP3Q9Y6F1 533 aa14.49□□□□□ -0.09
HMGCL-202ENST00000374487 ARFGEF2Q9Y6D5 1785 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 CPA1P15085 419 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 NECTIN1Q15223 517 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 MAP4K1Q92918 833 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 LARP6Q9BRS8 491 aaKnown RBP14.48□□□□□ -0.09
HMGCL-202ENST00000374487 TM6SF1Q9BZW5 370 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 PDRG1Q9NUG6 133 aa14.48□□□□□ -0.09
HMGCL-202ENST00000374487 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.48□□□□□ -0.09
HMGCL-202ENST00000374487 A0A0D9SFI3 127 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 ADCK5Q3MIX3 580 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 VPS53Q5VIR6 699 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 RNF20Q5VTR2 975 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 RUFY3Q7L099 469 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 PANK2Q9BZ23 570 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 AFDNP55196 1824 aaKnown RBP14.47□□□□□ -0.09
HMGCL-202ENST00000374487 WDR33Q9C0J8 1336 aaKnown RBP14.47□□□□□ -0.09
HMGCL-202ENST00000374487 A0A0G2JLW4 131 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 SERPINB2P05120 415 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 CREB3L3Q68CJ9 461 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 CAVIN1Q6NZI2 390 aaKnown RBP14.47□□□□□ -0.09
HMGCL-202ENST00000374487 KCNB2Q92953 911 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 EDC3Q96F86 508 aaKnown RBP14.47□□□□□ -0.09
HMGCL-202ENST00000374487 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
HMGCL-202ENST00000374487 DBNDD2Q9BQY9 259 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 ZSWIM6Q9HCJ5 1215 aa14.47□□□□□ -0.09
HMGCL-202ENST00000374487 CARMIL3Q8ND23 1372 aa14.46□□□□□ -0.09
HMGCL-202ENST00000374487 PSMA5P28066 241 aa14.46□□□□□ -0.09
HMGCL-202ENST00000374487 GAS2L3Q86XJ1 694 aa14.46□□□□□ -0.09
HMGCL-202ENST00000374487 NEUROD6Q96NK8 337 aa14.46□□□□□ -0.09
HMGCL-202ENST00000374487 SNRKQ9NRH2 765 aa14.46□□□□□ -0.09
HMGCL-202ENST00000374487 GPTP24298 496 aa14.46□□□□□ -0.1
HMGCL-202ENST00000374487 CHAMP1Q96JM3 812 aa14.46□□□□□ -0.1
HMGCL-202ENST00000374487 CHRNA5P30532 468 aa14.45□□□□□ -0.1
HMGCL-202ENST00000374487 KIF6Q6ZMV9 814 aa14.45□□□□□ -0.1
HMGCL-202ENST00000374487 ZSCAN31Q96LW9 406 aaPredicted RBP14.45□□□□□ -0.1
HMGCL-202ENST00000374487 SMC3Q9UQE7 1217 aa14.45□□□□□ -0.1
HMGCL-202ENST00000374487 SLC27A2O14975 620 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 IL15P40933 162 aaPredicted RBP14.44□□□□□ -0.1
HMGCL-202ENST00000374487 NDUFB9Q9Y6M9 179 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 SCN7AQ01118 1682 aa14.44□□□□□ -0.1
HMGCL-202ENST00000374487 MAP3K15Q6ZN16 1313 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms