RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.41□□□□□ -1.38
SRRM1-202ENST00000374389 HMGB1P09429 215 aaKnown RBP6.4□□□□□ -1.38
SRRM1-202ENST00000374389 ATP5JP18859 108 aa6.4□□□□□ -1.38
SRRM1-202ENST00000374389 FOXO4P98177 505 aa6.4□□□□□ -1.38
SRRM1-202ENST00000374389 DNM1Q05193 864 aaKnown RBP6.4□□□□□ -1.38
SRRM1-202ENST00000374389 LMBR1LQ6UX01 489 aa6.4□□□□□ -1.38
SRRM1-202ENST00000374389 PLBD2Q8NHP8 589 aa6.4□□□□□ -1.38
SRRM1-202ENST00000374389 HIP1O00291 1037 aa6.4□□□□□ -1.39
SRRM1-202ENST00000374389 A1BGP04217 495 aa6.4□□□□□ -1.39
SRRM1-202ENST00000374389 ZKSCAN1P17029 563 aaPredicted RBP6.4□□□□□ -1.39
SRRM1-202ENST00000374389 FAM173BQ6P4H8 233 aa6.4□□□□□ -1.39
SRRM1-202ENST00000374389 DNAJC2Q99543 621 aaKnown RBP6.4□□□□□ -1.39
SRRM1-202ENST00000374389 RPS6KB1P23443 525 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
SRRM1-202ENST00000374389 CDC37L1Q7L3B6 337 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ATG9AQ7Z3C6 839 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 TICAM2Q86XR7 235 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 TSPY26PQ9H489 355 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 SH2B1Q9NRF2 756 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ARFGEF2Q9Y6D5 1785 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 TCHHQ07283 1943 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 VPS37CA5D8V6 355 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-202ENST00000374389 H7C1W4 665 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 USPL1Q5W0Q7 1092 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ANP32BQ92688 251 aaKnown RBP6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ZSCAN31Q96LW9 406 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-202ENST00000374389 KCPQ6ZWJ8 1503 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 WDR17Q8IZU2 1322 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 PLEKHG2Q9H7P9 1386 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 A0A0G2JLW4 131 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 BLOC1S2Q6QNY1 142 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 FERMT3Q86UX7 667 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 PHF12Q96QT6 1004 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ARID3AQ99856 593 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 HAUS7Q99871 368 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 ZBTB3Q9H5J0 574 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
SRRM1-202ENST00000374389 CYP21A2P08686 494 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 UBE2HP62256 183 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 STK3Q13188 491 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 GLIPR1L2Q4G1C9 344 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 LRRC24Q50LG9 513 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 STOX1Q6ZVD7 989 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 TOM1L2Q6ZVM7 507 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 ZCRB1Q8TBF4 217 aaKnown RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 FAM163AQ96GL9 167 aaPredicted RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 ZNF594Q96JF6 807 aaPredicted RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 NOL7Q9UMY1 257 aaKnown RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 CHMP3Q9Y3E7 222 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 COL5A2P05997 1499 aaPredicted RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 PARP4Q9UKK3 1724 aaKnown RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 JAK2O60674 1132 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 PSMA5P28066 241 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 TIMM10P62072 90 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 TSGA10IPQ3SY00 556 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 CCDC183Q5T5S1 534 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 TTC6Q86TZ1 520 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 SECISBP2LQ93073 1101 aaKnown RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 FUCA2Q9BTY2 467 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 PUS3Q9BZE2 481 aaKnown RBP6.38□□□□□ -1.39
SRRM1-202ENST00000374389 PCDH11XQ9BZA7 1347 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 PCDH11YQ9BZA8 1340 aa6.38□□□□□ -1.39
SRRM1-202ENST00000374389 HCLS1P14317 486 aaPredicted RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 GIMAP6Q6P9H5 292 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 SYAP1Q96A49 352 aaPredicted RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 LRRC2Q9BYS8 371 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 TJP1Q07157 1748 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 AFDNP55196 1824 aaKnown RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 GOLIM4O00461 696 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 HS1BP3Q53T59 392 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 RNF20Q5VTR2 975 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 LARP1BQ659C4 914 aaKnown RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 MPNDQ8N594 471 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 TSPYL2Q9H2G4 693 aaPredicted RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 CWC25Q9NXE8 425 aaPredicted RBP6.37□□□□□ -1.39
SRRM1-202ENST00000374389 HMG20BQ9P0W2 317 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 LAMB4A4D0S4 1761 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 RFX7Q2KHR2 1363 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 TNS2Q63HR2 1409 aa6.37□□□□□ -1.39
SRRM1-202ENST00000374389 NKX1-1Q15270 411 aaPredicted RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 KBTBD3Q8NAB2 608 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 ALDH8A1Q9H2A2 487 aaPredicted RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 SOS2Q07890 1332 aaPredicted RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 MCMDC2Q4G0Z9 681 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 NEUROD6Q96NK8 337 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 NEK1Q96PY6 1258 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 USP25Q9UHP3 1055 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 ATP6V1DQ9Y5K8 247 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 XIRP1Q702N8 1843 aaKnown RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 NUP188Q5SRE5 1749 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 ERVV-2B6SEH9 535 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 EYA2O00167 538 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 AP5Z1O43299 807 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 GALR2O43603 387 aaPredicted RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 PHF14O94880 888 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 IL2RBP14784 551 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 LIG1P18858 919 aa6.36□□□□□ -1.39
SRRM1-202ENST00000374389 MSNP26038 577 aaKnown RBP6.36□□□□□ -1.39
SRRM1-202ENST00000374389 Q6ZUG5 572 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms