RNA–Protein interactions for RNA: ENST00000373741.8

PUM1-202, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 1 (best) BASIC

Gene PUM1, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-202ENST00000373741 SPDYE4A6NLX3 237 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
PUM1-202ENST00000373741 PCCAP05165 728 aaPredicted RBP13.81□□□□□ -0.2
PUM1-202ENST00000373741 CTSWP56202 376 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 STK3Q13188 491 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 MTX1Q13505 466 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 BCL9O00512 1426 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 TTC41PQ6P2S7 1318 aa13.81□□□□□ -0.2
PUM1-202ENST00000373741 FOSBP53539 338 aa13.8□□□□□ -0.2
PUM1-202ENST00000373741 LINC00116Q8NCU8 138 aa13.8□□□□□ -0.2
PUM1-202ENST00000373741 PDE8AO60658 829 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 ISCA1Q9BUE6 129 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 CIZ1Q9ULV3 898 aaPredicted RBP13.79□□□□□ -0.2
PUM1-202ENST00000373741 AKAP2Q9Y2D5 859 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 BARGINQ6ZT62 677 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 OSBPL3Q9H4L5 887 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 KDM4AO75164 1064 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 RBM25P49756 843 aaKnown RBP13.79□□□□□ -0.2
PUM1-202ENST00000373741 HAND2P61296 217 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 TTLL11Q8NHH1 800 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 VGLL3A8MV65 326 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 PPP4R3BQ5MIZ7 849 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 TRAPPC3LQ5T215 181 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 FBXW7Q969H0 707 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 CCDC94Q9BW85 323 aaPredicted RBP13.79□□□□□ -0.2
PUM1-202ENST00000373741 PAG1Q9NWQ8 432 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
PUM1-202ENST00000373741 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
PUM1-202ENST00000373741 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
PUM1-202ENST00000373741 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
PUM1-202ENST00000373741 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
PUM1-202ENST00000373741 PTH1RQ03431 593 aa13.78□□□□□ -0.2
PUM1-202ENST00000373741 COL18A1P39060 1754 aa13.78□□□□□ -0.2
PUM1-202ENST00000373741 ERFEQ4G0M1 354 aa13.77□□□□□ -0.2
PUM1-202ENST00000373741 KRT27Q7Z3Y8 459 aa13.77□□□□□ -0.2
PUM1-202ENST00000373741 PXDNLA1KZ92 1463 aa13.77□□□□□ -0.2
PUM1-202ENST00000373741 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 UBN2Q6ZU65 1347 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 TSC1Q92574 1164 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
PUM1-202ENST00000373741 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 SGSM2O43147 1006 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 RNF20Q5VTR2 975 aa13.77□□□□□ -0.21
PUM1-202ENST00000373741 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
PUM1-202ENST00000373741 APBA3O96018 575 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
PUM1-202ENST00000373741 NLRP3Q96P20 1036 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 ANKIB1Q9P2G1 1089 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
PUM1-202ENST00000373741 HIP1O00291 1037 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
PUM1-202ENST00000373741 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 LRP2BPQ9P2M1 347 aa13.76□□□□□ -0.21
PUM1-202ENST00000373741 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
PUM1-202ENST00000373741 ZAP70P43403 619 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 RFX5P48382 616 aaPredicted RBP13.75□□□□□ -0.21
PUM1-202ENST00000373741 SLC4A8Q2Y0W8 1093 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 COL15A1P39059 1388 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 ANKRD18AQ8IVF6 992 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 SYCE3A1L190 88 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 ATG9AQ7Z3C6 839 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 FNBP4Q8N3X1 1017 aaPredicted RBP13.75□□□□□ -0.21
PUM1-202ENST00000373741 CACNA1FO60840 1977 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 NUCB2P80303 420 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 RABL6Q3YEC7 729 aaPredicted RBP13.75□□□□□ -0.21
PUM1-202ENST00000373741 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 CHST3Q7LGC8 479 aa13.75□□□□□ -0.21
PUM1-202ENST00000373741 ZNF589Q86UQ0 364 aaPredicted RBP13.75□□□□□ -0.21
PUM1-202ENST00000373741 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 PDCL2Q8N4E4 241 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 TERF1P54274 439 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 KLHL40Q2TBA0 621 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 CDC5LQ99459 802 aaKnown RBP13.74□□□□□ -0.21
PUM1-202ENST00000373741 RAI14Q9P0K7 980 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 KIF3AQ9Y496 699 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 SCN11AQ9UI33 1791 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 UTYO14607 1347 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 TNNT3P45378 269 aaPredicted RBP13.74□□□□□ -0.21
PUM1-202ENST00000373741 CASP7P55210 303 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 SLC9C2Q5TAH2 1124 aa13.74□□□□□ -0.21
PUM1-202ENST00000373741 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
PUM1-202ENST00000373741 SYAP1Q96A49 352 aaPredicted RBP13.74□□□□□ -0.21
PUM1-202ENST00000373741 RBM27Q9P2N5 1060 aaKnown RBP13.74□□□□□ -0.21
PUM1-202ENST00000373741 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
PUM1-202ENST00000373741 SLC5A1P13866 664 aa13.73□□□□□ -0.21
PUM1-202ENST00000373741 PARP10Q53GL7 1025 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms