RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 RXRAP19793 462 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 BRPF1P55201 1214 aaPredicted RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 RASEFQ8IZ41 740 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 MAP2P11137 1827 aaKnown RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 EYA2O00167 538 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 ZNF213O14771 459 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 UBE2HP62256 183 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 SART3Q15020 963 aaKnown RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 CAVIN4Q5BKX8 364 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 MICU3Q86XE3 530 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 AMOTL1Q8IY63 956 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 FAM177A1Q8N128 213 aaPredicted RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 UTP14AQ9BVJ6 771 aaKnown RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 LMBRD1Q9NUN5 540 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 DACT1Q9NYF0 836 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 KIAA1210Q9ULL0 1709 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 DIP2AQ14689 1571 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 ERVV-2B6SEH9 535 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 F8W031 263 aaPredicted RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 KCNQ2O43526 872 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 TMEM63CQ9P1W3 806 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 CCNL1Q9UK58 526 aaPredicted RBP9.14□□□□□ -0.95
HERC4-202ENST00000373700 CCDC171Q6TFL3 1326 aa9.14□□□□□ -0.95
HERC4-202ENST00000373700 CCDC69A6NI79 296 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 RANBP6O60518 1105 aaKnown RBP9.13□□□□□ -0.95
HERC4-202ENST00000373700 APOBRQ0VD83 1088 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 TTLL5Q6EMB2 1281 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 PI16Q6UXB8 463 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 C8orf76Q96K31 380 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 NACAP1Q9BZK3 213 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 MAP3K12Q12852 859 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 CCDC191Q8NCU4 936 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 TTC41PQ6P2S7 1318 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 TCIRG1Q13488 830 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 CCDC152Q4G0S7 254 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 MCMDC2Q4G0Z9 681 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 NAT10Q9H0A0 1025 aaKnown RBP9.13□□□□□ -0.95
HERC4-202ENST00000373700 NSFL1CQ9UNZ2 370 aaKnown RBP9.13□□□□□ -0.95
HERC4-202ENST00000373700 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
HERC4-202ENST00000373700 A0A0D9SFI3 127 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 HLFQ16534 295 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ANKRD18AQ8IVF6 992 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 RPGRQ92834 1020 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 XAGE2Q96GT9 111 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 NLRP3Q96P20 1036 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 RTCBQ9Y3I0 505 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 CEP170BQ9Y4F5 1589 aaPredicted RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 LOC102724428A0A0B4J2F2 783 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 SIK1P57059 783 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ADCK5Q3MIX3 580 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 RUFY3Q7L099 469 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 FSIP1Q8NA03 581 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 CDC5LQ99459 802 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 TRIM34Q9BYJ4 488 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 GREM2Q9H772 168 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ORC3Q9UBD5 711 aaPredicted RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 DLC1Q96QB1 1528 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 KDM4FA0A1W2PPD8 638 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ADORA1P30542 326 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ZNF165P49910 485 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ZSCAN25Q6NSZ9 544 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 DZIP1Q86YF9 867 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 ZSCAN29Q8IWY8 852 aaPredicted RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 UBAC1Q9BSL1 405 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 TFCP2L1Q9NZI6 479 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 DBNLQ9UJU6 430 aaKnown RBP9.12□□□□□ -0.95
HERC4-202ENST00000373700 SH3TC1Q8TE82 1336 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 KDRP35968 1356 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 CRB1P82279 1406 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 MED14O60244 1454 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 KLF18A0A0U1RQI7 1052 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 SERPINC1P01008 464 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 HSPA4P34932 840 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ZAP70P43403 619 aa9.12□□□□□ -0.95
HERC4-202ENST00000373700 ZNF622Q969S3 477 aaKnown RBP eCLIP9.12□□□□□ -0.95
HERC4-202ENST00000373700 RAD50Q92878 1312 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 IBTKQ9P2D0 1353 aaPredicted RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 TECPR2O15040 1411 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 SASH1O94885 1247 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 CHGBP05060 677 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 CLCN1P35523 988 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 HSP90AA4PQ58FG1 418 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 OLFM4Q6UX06 510 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 ZKSCAN3Q9BRR0 538 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 SLC27A2O14975 620 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 CLSTN1O94985 981 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 CYP7A1P22680 504 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 IKQ13123 557 aaPredicted RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 NBPF14Q5TI25 921 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 OTUD7BQ6GQQ9 843 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
HERC4-202ENST00000373700 INTS4Q96HW7 963 aaKnown RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 TRMT1Q9NXH9 659 aaKnown RBP9.11□□□□□ -0.95
HERC4-202ENST00000373700 IFIT3O14879 490 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms