RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 MRPS27Q92552 414 aaKnown RBP27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 PRIMPOLQ96LW4 560 aa27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 PAIP2Q9BPZ3 127 aaKnown RBP27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 IL16Q14005 1332 aa27.35■■□□□ 1.97
RAPGEF1-203ENST00000372195 TMEM110-MUSTN1A8MSY1 372 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 LMOD1P29536 600 aaPredicted RBP27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 AK2P54819 239 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 GOLGA6L9A6NEM1 432 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 KARSQ15046 597 aaKnown RBP27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 NF2P35240 595 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 ZNF622Q969S3 477 aaKnown RBP eCLIP27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 IGSF3O75054 1194 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 STX17P56962 302 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 CETN1Q12798 172 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 NSD2O96028 1365 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 BAG3O95817 575 aa27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 CRNKL1Q9BZJ0 848 aaKnown RBP27.34■■□□□ 1.97
RAPGEF1-203ENST00000372195 ANKRD44Q8N8A2 993 aa27.33■■□□□ 1.97
RAPGEF1-203ENST00000372195 RTL1A6NKG5 1358 aa27.33■■□□□ 1.97
RAPGEF1-203ENST00000372195 LMBR1LQ6UX01 489 aa27.33■■□□□ 1.97
RAPGEF1-203ENST00000372195 PLIN2Q99541 437 aa27.33■■□□□ 1.97
RAPGEF1-203ENST00000372195 ANKRD36BQ8N2N9 1353 aa27.33■■□□□ 1.97
RAPGEF1-203ENST00000372195 ATP8B2P98198 1209 aa27.32■■□□□ 1.96
RAPGEF1-203ENST00000372195 RSPH14Q9UHP6 348 aa27.32■■□□□ 1.96
RAPGEF1-203ENST00000372195 TBCAO75347 108 aaKnown RBP27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 CPA1P15085 419 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 FAM200AQ8TCP9 573 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 SLC9C2Q5TAH2 1124 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 KRT222Q8N1A0 295 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 GJC1P36383 396 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 KCNG4Q8TDN1 519 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 KRT23Q9C075 422 aa27.31■■□□□ 1.96
RAPGEF1-203ENST00000372195 TYRO3Q06418 890 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 CWF19L2Q2TBE0 894 aaKnown RBP27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 RMND1Q9NWS8 449 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 ASXL1Q8IXJ9 1541 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 CEP112Q8N8E3 955 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 GRM8O00222 908 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 LRRC59Q96AG4 307 aaKnown RBP27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 NGLY1Q96IV0 654 aa27.3■■□□□ 1.96
RAPGEF1-203ENST00000372195 CEP63Q96MT8 703 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CLCN1P35523 988 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 MIGA1Q8NAN2 632 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 ATP2B3Q16720 1220 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 PAG1Q9NWQ8 432 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CTAGE15A4D2H0 777 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 DTNBO60941 627 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CTAGE8P0CG41 777 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CTAGE6Q86UF2 777 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CTAGE4Q8IX94 777 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 HOMER2Q9NSB8 354 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 JAG2Q9Y219 1238 aa27.29■■□□□ 1.96
RAPGEF1-203ENST00000372195 CCDC152Q4G0S7 254 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 UQCRFS1P1P0C7P4 283 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 ASIC1P78348 528 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 KIAA0753Q2KHM9 967 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 CABP5Q9NP86 173 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 TIGD1Q96MW7 591 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 LZTFL1Q9NQ48 299 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 FSD2A1L4K1 749 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 RFC4P35249 363 aa27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 HELBQ8NG08 1087 aaPredicted RBP27.28■■□□□ 1.96
RAPGEF1-203ENST00000372195 HLA-DOAP06340 250 aa27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 NBPF6Q5VWK0 638 aa27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 NBPF5PQ86XG9 351 aaPredicted RBP27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 NBPF4Q96M43 638 aa27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 MTHFSDQ2M296 383 aaKnown RBP27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 ARHGAP45Q92619 1136 aa27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 STAMBPO95630 424 aa27.27■■□□□ 1.96
RAPGEF1-203ENST00000372195 A0A1W2PRG0 241 aa27.26■■□□□ 1.96
RAPGEF1-203ENST00000372195 MNAT1P51948 309 aa27.26■■□□□ 1.96
RAPGEF1-203ENST00000372195 TFCP2Q12800 502 aa27.26■■□□□ 1.96
RAPGEF1-203ENST00000372195 COMMD10Q9Y6G5 202 aa27.26■■□□□ 1.96
RAPGEF1-203ENST00000372195 EIF4A2Q14240 407 aaKnown RBP27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 CREB3L3Q68CJ9 461 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 CEP85Q6P2H3 762 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 PPIP5K1Q6PFW1 1433 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 MCM7P33993 719 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 ZKSCAN3Q9BRR0 538 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 LDHCP07864 332 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 PPM1FP49593 454 aaPredicted RBP27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 NAPAP54920 295 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 SPAG5Q96R06 1193 aa27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 PYM1Q9BRP8 204 aaKnown RBP27.26■■□□□ 1.95
RAPGEF1-203ENST00000372195 CALM1P0DP23 149 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 CALM2P0DP24 149 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 CALM3P0DP25 149 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 TBC1D5Q92609 795 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 MRVI1Q9Y6F6 885 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 SPTLC2O15270 562 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 KRT13P13646 458 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 ESR2Q92731 530 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 DNAI2Q9GZS0 605 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 SMIM23A6NLE4 172 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 CYLC1P35663 651 aaPredicted RBP27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 RAB3GAP1Q15042 981 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 CTAGE1Q96RT6 745 aa27.25■■□□□ 1.95
RAPGEF1-203ENST00000372195 IFNKQ9P0W0 207 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms