RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 ST7Q9NRC1 585 aa15.19■□□□□ 0.02
CHD1L-202ENST00000369258 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
CHD1L-202ENST00000369258 ANKRD1Q15327 319 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 NEK1Q96PY6 1258 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 USP28Q96RU2 1077 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 PLEKHG1Q9ULL1 1385 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 A0A1B0GVL5 298 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 HIP1O00291 1037 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 AKAP4Q5JQC9 854 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 GCP02774 474 aa15.18■□□□□ 0.02
CHD1L-202ENST00000369258 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
CHD1L-202ENST00000369258 A0A0U1RQG5 324 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-202ENST00000369258 GOLGA8FQ08AF8 430 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 GOLGA8DPQ0D2H9 430 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 MTX1Q13505 466 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
CHD1L-202ENST00000369258 LRRN4CLQ8ND94 238 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 CLSTN2Q9H4D0 955 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 DENND2AQ9ULE3 1009 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 UBR1Q8IWV7 1749 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 NEURL1BA8MQ27 555 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 CTDNEP1O95476 244 aa15.17■□□□□ 0.02
CHD1L-202ENST00000369258 PLEKHO1Q53GL0 409 aaPredicted RBP15.17■□□□□ 0.02
CHD1L-202ENST00000369258 TOPAZ1Q8N9V7 1692 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 GTF3C6Q969F1 213 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 NLRP2Q9NX02 1062 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 LRRC37A3O60309 1634 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 SMTNL1A8MU46 457 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 HOXB7P09629 217 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 RXRAP19793 462 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 ME1P48163 572 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 RESTQ13127 1097 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 CHRNA2Q15822 529 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
CHD1L-202ENST00000369258 ZNF609O15014 1411 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 GCKRQ14397 625 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 PTPN12Q05209 780 aaKnown RBP15.15■□□□□ 0.02
CHD1L-202ENST00000369258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.15■□□□□ 0.02
CHD1L-202ENST00000369258 PLA2G4DQ86XP0 818 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 AOPEPQ8N6M6 819 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 TDRD7Q8NHU6 1098 aaKnown RBP15.15■□□□□ 0.02
CHD1L-202ENST00000369258 TMX1Q9H3N1 280 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 TNNI3KQ59H18 835 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 CCDC112Q8NEF3 446 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 FPGT-TNNI3KV9GXZ4 949 aa15.15■□□□□ 0.02
CHD1L-202ENST00000369258 A0A087WZG4 1122 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 ALDH1L1O75891 902 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 LMBR1LQ6UX01 489 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 PI16Q6UXB8 463 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 ZNF215Q9UL58 517 aaPredicted RBP15.14■□□□□ 0.01
CHD1L-202ENST00000369258 TBX22Q9Y458 520 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 PTPDC1A2A3K4 754 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 GOLGA6L19H0YKK7 550 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 FEZ1Q99689 392 aa15.14■□□□□ 0.01
CHD1L-202ENST00000369258 BECN2A8MW95 431 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 ZNF790Q6PG37 636 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 ZBTB22O15209 634 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 SKILP12757 684 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 ADD1P35611 737 aaKnown RBP15.13■□□□□ 0.01
CHD1L-202ENST00000369258 LRRC24Q50LG9 513 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 GORABQ5T7V8 394 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 RBM43Q6ZSC3 357 aaKnown RBP15.13■□□□□ 0.01
CHD1L-202ENST00000369258 PAXBP1Q9Y5B6 917 aa15.13■□□□□ 0.01
CHD1L-202ENST00000369258 N4BP2Q86UW6 1770 aaPredicted RBP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 KIF20AO95235 890 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 FKBP4Q02790 459 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 FSIP1Q8NA03 581 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 DDX21Q9NR30 783 aaKnown RBP eCLIP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 IQCB1Q15051 598 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 NSUN7Q8NE18 718 aaKnown RBP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 PUS3Q9BZE2 481 aaKnown RBP15.12■□□□□ 0.01
CHD1L-202ENST00000369258 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 LRRC8AQ8IWT6 810 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 OGFRQ9NZT2 677 aa15.12■□□□□ 0.01
CHD1L-202ENST00000369258 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
CHD1L-202ENST00000369258 DPCR1Q3MIW9 517 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 HMG20BQ9P0W2 317 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
CHD1L-202ENST00000369258 SYCP1Q15431 976 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 ELF2Q15723 593 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 CEP135Q66GS9 1140 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
CHD1L-202ENST00000369258 ZBTB3Q9H5J0 574 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 CLIC4Q9Y696 253 aa15.11■□□□□ 0.01
CHD1L-202ENST00000369258 CAVIN2O95810 425 aa15.1■□□□□ 0.01
CHD1L-202ENST00000369258 MARCKSP29966 332 aaPredicted RBP15.1■□□□□ 0.01
CHD1L-202ENST00000369258 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
CHD1L-202ENST00000369258 DDX58O95786 925 aaKnown RBP15.1■□□□□ 0.01
CHD1L-202ENST00000369258 DHX40Q8IX18 779 aaKnown RBP15.1■□□□□ 0.01
CHD1L-202ENST00000369258 ALDH8A1Q9H2A2 487 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms